Non-Coding RNA Search

Lng1-LNG010104B12

Sequence:


               
               AGTCTGCCTGAACTTGGCCGACCCTCGCGGCATCTTCCTGGCACCTCACGGGCCACGATC
TTGAGGGAGGCGAGTAGACCCGCCGGTCTCCTGGAGGACCTCAGGGTCCCTGGGCTGGGG
AGGAGGCTGGAGGGATGCTGAGGGGTAGAAGCGAAGTGAAGAAGGGTTAGGCTTGCTGCT
ACAGGAGTGATTGGAGTAGAGCGAAGTCTCTTTCCTCCTGAGAAATTTCTCCTAATGCAC
CTGGCCAACTCTTACTCATCCGTCAAAACCCCTTTCCAAATTATGTTCTCCCGTACTTTA
AGAAGTTGTCTCAAAACTAAGATTGAGCTTTGGCATCCTTCTCTGGGTTTCCTCCCACCC
TGACTGCTCCTGGCGGGGTGTGTAGGTGTTCAGAACCATACCCCCCCCACCACCTCATAA
GGTGAGGTCCTAGGGTCCCCATCACTAATTAACACAGCTGGAAGCAACAGCGGGGTAGAT
GAGTGAATGTAGGATGTAGGGAATGCTGTGGAATACCGCAGGCAGGGAGGGGACTGGGGA
CTCAGGACTGGGTCCTGGCANGGGTGGGTGGGAGGCCGAGGGTGGGGTAGAGCTGCTTCT
GTCCCTGCCACTGCCCCGCCTTCTGTGTTCCTGATCTTCTGTCTTGTTACTTTTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTCTGCCTGAACTTGGCCGACCCTCGCGGCATCTTCCTGGCACCTCACGGGCCACGATC
TTGAGGGAGGCGAGTAGACCCGCCGGTCTCCTGGAGGACCTCAGGGTCCCTGGGCTGGGG
AGGAGGCTGGAGGGATGCTGAGGGGTAGAAGCGAAGTGAAGAAGGGTTAGGCTTGCTGCT
ACAGGAGTGATTGGAGTAGAGCGAAGTCTCTTTCCTCCTGAGAAATTTCTCCTAATGCAC
CTGGCCAACTCTTACTCATCCGTCAAAACCCCTTTCCAAATTATGTTCTCCCGTACTTTA
AGAAGTTGTCTCAAAACTAAGATTGAGCTTTGGCATCCTTCTCTGGGTTTCCTCCCACCC
TGACTGCTCCTGGCGGGGTGTGTAGGTGTTCAGAACCATACCCCCCCCACCACCTCATAA
GGTGAGGTCCTAGGGTCCCCATCACTAATTAACACAGCTGGAAGCAACAGCGGGGTAGAT
GAGTGAATGTAGGATGTAGGGAATGCTGTGGAATACCGCAGGCAGGGAGGGGACTGGGGA
CTCAGGACTGGGTCCTGGCANGGGTGGGTGGGAGGCCGAGGGTGGGGTAGAGCTGCTTCT
GTCCCTGCCACTGCCCCGCCTTCTGTGTTCCTGATCTTCTGTCTTGTTACTTTTAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               81-200, + strand, RNAz p=0.737449

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               81-200, + strand, RNAz p=0.737449

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-655, gnl|bosTau2|chr7 (16500673-16501301)
               

               
               2-655, gnl|Hg17|chr19 (2928570-2929194)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-655, gnl|bosTau2|chr7 (16500673-16501301)
               

               
               2-655, gnl|Hg17|chr19 (2928570-2929194)

	2-655, gnl\|bosTau2\|chr7 (16500673-16501301)
	2-655, gnl\|Hg17\|chr19 (2928570-2929194)