Non-Coding RNA Search

Lng1-LNG010108E03

Sequence:


               
               AGAAATGACTAGATACATCCCAGGGCCAGCTTGAGGGGCTAAAGGGATCGTGTTCACCAA
GAAACTTCCTGCAAATGGAATCATGTCACTACTCCTTGACATGTGACCTTGATATAAAGG
ATGAATTTAATACTCTCAGACAGAAGGAATTAGAAGAGAGTCTAGATTTTCTCTAGCATC
CTTCCATACTTAATAAAGAAAGGAAAGGCCCTTAGCCTTTATTGCAATACAGATCTGATT
GAGTCAAACCCACACATCTGCAAGGGTCAGTCAGATTTACAGAGTAAACTTTTTCTTTTC
CAAAAATCTAAATTCCAGAGGATTAAAATATCTCTGTTTGGGAACATCTTCCCTGGCACA
CAGCTGAAGTTAAGTGCCTGCAGATGGCCAGAGCCCTGTTGGGCAGAGGCATAGTGTTGG
GGTACAGCTTGCGTTGAACTGGACTCCAGGAGAAGCTGATGAGTCCTACCATAGCATTTT
AATTGGTGGTGGGGATGAGGGAGAGGGGTATGTTAGCAGCCAAGTCAGCTGCATAAGCGC
CAATTAGGGAGATTTTCCACATTGTTTTGCATTTTTTTCCAGATTTTTCTATTTAAAAAT
ACTGCTCTTTAAGAGGGAGTGCTGATATGGTTTCCATCCTGTGCCAAAGATGACAGTAAC
TGGGAGGCTCTGAGGAGACTGGGTCTGTCCATCCAGGAGGACAGGTTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAATGACTAGATACATCCCAGGGCCAGCTTGAGGGGCTAAAGGGATCGTGTTCACCAA
GAAACTTCCTGCAAATGGAATCATGTCACTACTCCTTGACATGTGACCTTGATATAAAGG
ATGAATTTAATACTCTCAGACAGAAGGAATTAGAAGAGAGTCTAGATTTTCTCTAGCATC
CTTCCATACTTAATAAAGAAAGGAAAGGCCCTTAGCCTTTATTGCAATACAGATCTGATT
GAGTCAAACCCACACATCTGCAAGGGTCAGTCAGATTTACAGAGTAAACTTTTTCTTTTC
CAAAAATCTAAATTCCAGAGGATTAAAATATCTCTGTTTGGGAACATCTTCCCTGGCACA
CAGCTGAAGTTAAGTGCCTGCAGATGGCCAGAGCCCTGTTGGGCAGAGGCATAGTGTTGG
GGTACAGCTTGCGTTGAACTGGACTCCAGGAGAAGCTGATGAGTCCTACCATAGCATTTT
AATTGGTGGTGGGGATGAGGGAGAGGGGTATGTTAGCAGCCAAGTCAGCTGCATAAGCGC
CAATTAGGGAGATTTTCCACATTGTTTTGCATTTTTTTCCAGATTTTTCTATTTAAAAAT
ACTGCTCTTTAAGAGGGAGTGCTGATATGGTTTCCATCCTGTGCCAAAGATGACAGTAAC
TGGGAGGCTCTGAGGAGACTGGGTCTGTCCATCCAGGAGGACAGGTTCAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               191-336, - strand, RNAz p=0.811301

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               191-336, - strand, RNAz p=0.811301

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-687, gnl|bosTau2|chr5 (14362363-14361674)
               

               
               1-687, gnl|Hg17|chr8 (102954311-102952618)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-687, gnl|bosTau2|chr5 (14362363-14361674)
               

               
               1-687, gnl|Hg17|chr8 (102954311-102952618)

	1-687, gnl\|bosTau2\|chr5 (14362363-14361674)
	1-687, gnl\|Hg17\|chr8 (102954311-102952618)