Non-Coding RNA Search

Lng1-LNG010109F06

Sequence:


               
               TATTGAATAAATAATTACATAAAGATGGTGCGATTATGGCAAAACTTGTAAATGTGATAA
ATGGCTTAAACTGGGGACATACTGGATGTTGCAACAGCCACTGAGTGGAGGCCAGGTGAT
GAGTGAGCGAGGCAGCCTGCCTTCTTGACCCTTATAGGCAAGTAATGTGGGGGTGGCATT
ACTCTGATCACCCCCAGCTAACCAATCACAGTTGTGATACAGGCTGTGCACGTGATGTCC
TTGCTGCCCCTCCGGAGAAAAGGCCAAGGAGTGGTGATGGTGGATATAATTTTGAATCCA
ATTAAGTGGAGACCCCTGGAAGTTGGGGTGTCTCAGAGCAGAAGAGTCCAACAGCAATTT
TGTCACCTCCTCGTATGGCTTTCCAGTGGCTTTTCTGGTAACCCCCTGGAAGATGGGAGC
TGTAGGAAATTTGTTATTACTTCCTTAGTAGTGATAGCATTCCTTATTAGTCATCCTATT
GTCTCAGAATTTCCATGGCATGTAAATGCTTGGGTGAGGGGTGGTGGTAACGAGACAGCA
GATGGGGGGCACTTTGAAAGCAAAGTAGTGTCAGCTCCCACAGAAGGTCTAATTTTAAAC
ATGCAAATAGTTTTCAGTTCCACTTTTCCTTCTTCCTGTTAGAGGGAAGCAGTCCTCTGG
TGCCATTTCTGAGGCTTGAACAGGCAATGTCGTTATTATGCCTCAAACTATCTCCTTCTT
CAGGGCAGGAATGGGGTGGTGTTTTTCGGAGAGCCTGTGCCAGTCCCCCGCCAGTGTTAT
TTCATGGCTTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTGAATAAATAATTACATAAAGATGGTGCGATTATGGCAAAACTTGTAAATGTGATAA
ATGGCTTAAACTGGGGACATACTGGATGTTGCAACAGCCACTGAGTGGAGGCCAGGTGAT
GAGTGAGCGAGGCAGCCTGCCTTCTTGACCCTTATAGGCAAGTAATGTGGGGGTGGCATT
ACTCTGATCACCCCCAGCTAACCAATCACAGTTGTGATACAGGCTGTGCACGTGATGTCC
TTGCTGCCCCTCCGGAGAAAAGGCCAAGGAGTGGTGATGGTGGATATAATTTTGAATCCA
ATTAAGTGGAGACCCCTGGAAGTTGGGGTGTCTCAGAGCAGAAGAGTCCAACAGCAATTT
TGTCACCTCCTCGTATGGCTTTCCAGTGGCTTTTCTGGTAACCCCCTGGAAGATGGGAGC
TGTAGGAAATTTGTTATTACTTCCTTAGTAGTGATAGCATTCCTTATTAGTCATCCTATT
GTCTCAGAATTTCCATGGCATGTAAATGCTTGGGTGAGGGGTGGTGGTAACGAGACAGCA
GATGGGGGGCACTTTGAAAGCAAAGTAGTGTCAGCTCCCACAGAAGGTCTAATTTTAAAC
ATGCAAATAGTTTTCAGTTCCACTTTTCCTTCTTCCTGTTAGAGGGAAGCAGTCCTCTGG
TGCCATTTCTGAGGCTTGAACAGGCAATGTCGTTATTATGCCTCAAACTATCTCCTTCTT
CAGGGCAGGAATGGGGTGGTGTTTTTCGGAGAGCCTGTGCCAGTCCCCCGCCAGTGTTAT
TTCATGGCTTCTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               319-513, + strand, RNAz p=0.895499

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               319-513, + strand, RNAz p=0.895499

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-793, gnl|bosTau2|chr15 (49785185-49785972)
               

               
               1-793, gnl|Hg17|chr11 (47965491-47966257)
               

               
               1-793, gnl|Mm7|chr2 (90425593-90424802)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-793, gnl|bosTau2|chr15 (49785185-49785972)
               

               
               1-793, gnl|Hg17|chr11 (47965491-47966257)
               

               
               1-793, gnl|Mm7|chr2 (90425593-90424802)

	1-793, gnl\|bosTau2\|chr15 (49785185-49785972)
	1-793, gnl\|Hg17\|chr11 (47965491-47966257)
	1-793, gnl\|Mm7\|chr2 (90425593-90424802)