Non-Coding RNA Search

Lng1-LNG010110B12

Sequence:


               
               ACTAATTCTTGCCCAGTGGTGGGGACAAGCCCGAGTCCTCTGCGGCCGTAGTCCGCCGCC
CCAAATCTCTGGCCCGGGACACTGAGTTAGAGCCACCTGTGGGCTTCAGCTCTAGCCGCC
TGGCCAGGCTCTGCCTTTCGCCCGGTCCTTCCAGCGGCGTTGACGCTCTTGCCTGGACGC
ATACAGTGTGCCAGGCCCGAGCTGGAAGCTGGGAACCGGTGCGCATCACATACCTCGTGG
GGCTTGTACTCTACGAGCCAGACACGCTCATCGCAGAATCACACACTATAAATGTGTAAT
CAGGGAACTTTAATGAGGACCAGCGTGGCCTGCAGGTCGGGGAAGGTTTCTCTGAAGACC
TTAAGGCATTCACCAGGTGAAGGTGGTTGGGGTCGGTGGGAGTTCGGTGGAAGAGGGCAG
CGCAGGTGGAGAGGGCATTCGGTGTGAGAGACTCCAGGCAGCTGGGCAATGAAAGGAGAG
GTGGGGGCACACAGCAGATCCCCTCCTAGGCATCTACTATTGAGAAATCTGCCCATAGTG
CAGCCAGAGACCGCCTGCAAGAATGTTCCCACGGGCGCTGTTCCTAATAAAAACATTGGA
ATCACCCAGATGCCTGTCCACAGGCAAGGGGGCAAATAAACTGGAATAGTCACATCAAGG
AATATGATACAGCAGTGAAACTGAATGAACTTCAGCAGACGAAACAGATCTATCTCAGAA
ACAATGTTGGAAAAAAAAGTCCTAGGAGTCCCTGCTGTAATGCAGTGGGTTAAGAATCGG
ACTCCACCGGCTTGGGTCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTAATTCTTGCCCAGTGGTGGGGACAAGCCCGAGTCCTCTGCGGCCGTAGTCCGCCGCC
CCAAATCTCTGGCCCGGGACACTGAGTTAGAGCCACCTGTGGGCTTCAGCTCTAGCCGCC
TGGCCAGGCTCTGCCTTTCGCCCGGTCCTTCCAGCGGCGTTGACGCTCTTGCCTGGACGC
ATACAGTGTGCCAGGCCCGAGCTGGAAGCTGGGAACCGGTGCGCATCACATACCTCGTGG
GGCTTGTACTCTACGAGCCAGACACGCTCATCGCAGAATCACACACTATAAATGTGTAAT
CAGGGAACTTTAATGAGGACCAGCGTGGCCTGCAGGTCGGGGAAGGTTTCTCTGAAGACC
TTAAGGCATTCACCAGGTGAAGGTGGTTGGGGTCGGTGGGAGTTCGGTGGAAGAGGGCAG
CGCAGGTGGAGAGGGCATTCGGTGTGAGAGACTCCAGGCAGCTGGGCAATGAAAGGAGAG
GTGGGGGCACACAGCAGATCCCCTCCTAGGCATCTACTATTGAGAAATCTGCCCATAGTG
CAGCCAGAGACCGCCTGCAAGAATGTTCCCACGGGCGCTGTTCCTAATAAAAACATTGGA
ATCACCCAGATGCCTGTCCACAGGCAAGGGGGCAAATAAACTGGAATAGTCACATCAAGG
AATATGATACAGCAGTGAAACTGAATGAACTTCAGCAGACGAAACAGATCTATCTCAGAA
ACAATGTTGGAAAAAAAAGTCCTAGGAGTCCCTGCTGTAATGCAGTGGGTTAAGAATCGG
ACTCCACCGGCTTGGGTCATT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               548-661, - strand, RNAz p=0.70577

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               548-661, - strand, RNAz p=0.70577

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-726, gnl|bosTau2|chr13 (53876169-53875445)
               

               
               4-726, gnl|Hg17|chr20 (42713888-42714566)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-726, gnl|bosTau2|chr13 (53876169-53875445)
               

               
               4-726, gnl|Hg17|chr20 (42713888-42714566)

	4-726, gnl\|bosTau2\|chr13 (53876169-53875445)
	4-726, gnl\|Hg17\|chr20 (42713888-42714566)