Non-Coding RNA Search

Lng1-LNG010110H02

Sequence:


               
               GAAGAGAAGTTCTAAACTTGTGTGCTGGAGCCTCTTTCATCAATAAATGACTGAGGCATT
TAGAACCAAGGAGCTGGCCCAAGGTAGCAGGAACTCCTAGCTAGTTTTTCTTTCCTTCCA
GTTTATACCTATTTCACGAGTTACACAAACCGTCTTTACAATTTTCAGCAAATGTTTTTC
TTATTGCTGTTAAATATGCTTCAGGCATACCCTTGTGGTGCAATGGGTTAAGGATCTAGT
GTCACAcagtggcttgagttgctcctgtagcttgggttcaattcctggccacggaacttc
cacatgcTGTGAACAAGGCCAAAAATAGAAAGATATTTCATATCCTTAAGGTTTTAGTTC
TCTAACATTAGGGTGACAGTTATTATAAGACCTTTTTTTATGACTTCGCTAAATGTTTTC
CCCATCTGTTACAGTAAAAACAAACTAAAACTATGGGAGAAAGAAGTTTCCCATGACTAT
TTATAAAGGGCCAAATGTCTTCAGTTTTGCATACAAACTTCATATCTGAGGAATGAATCC
CTTGGAAAAGACTCTCAAAGACTGACTAGTCTTTGGAAAAAATGCTTGAGTGAGCTTGGT
TTTTGTTTTTTTCTTCCTCATATACTTTAAGTTCACAATGCTGTTTATAAGTGTAAAGAA
GTTAAACCTATTTATTGACTTCAGACATAAAAAGAGCTGTGGAGTTGAATTGCAGAGTAG
TTTGAGAAAAAAATAATTGAGGTGGCCATCTCATTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGAGAAGTTCTAAACTTGTGTGCTGGAGCCTCTTTCATCAATAAATGACTGAGGCATT
TAGAACCAAGGAGCTGGCCCAAGGTAGCAGGAACTCCTAGCTAGTTTTTCTTTCCTTCCA
GTTTATACCTATTTCACGAGTTACACAAACCGTCTTTACAATTTTCAGCAAATGTTTTTC
TTATTGCTGTTAAATATGCTTCAGGCATACCCTTGTGGTGCAATGGGTTAAGGATCTAGT
GTCACAcagtggcttgagttgctcctgtagcttgggttcaattcctggccacggaacttc
cacatgcTGTGAACAAGGCCAAAAATAGAAAGATATTTCATATCCTTAAGGTTTTAGTTC
TCTAACATTAGGGTGACAGTTATTATAAGACCTTTTTTTATGACTTCGCTAAATGTTTTC
CCCATCTGTTACAGTAAAAACAAACTAAAACTATGGGAGAAAGAAGTTTCCCATGACTAT
TTATAAAGGGCCAAATGTCTTCAGTTTTGCATACAAACTTCATATCTGAGGAATGAATCC
CTTGGAAAAGACTCTCAAAGACTGACTAGTCTTTGGAAAAAATGCTTGAGTGAGCTTGGT
TTTTGTTTTTTTCTTCCTCATATACTTTAAGTTCACAATGCTGTTTATAAGTGTAAAGAA
GTTAAACCTATTTATTGACTTCAGACATAAAAAGAGCTGTGGAGTTGAATTGCAGAGTAG
TTTGAGAAAAAAATAATTGAGGTGGCCATCTCATTAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               465-663, - strand, RNAz p=0.953305

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               465-663, - strand, RNAz p=0.953305

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               336-693, gnl|bosTau2|chr2 (23007720-23008072)
               

               
               336-693, gnl|Hg17|chr2 (165516195-165515827)
               

               
               336-693, gnl|Mm7|chr2 (65160274-65159975)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               336-693, gnl|bosTau2|chr2 (23007720-23008072)
               

               
               336-693, gnl|Hg17|chr2 (165516195-165515827)
               

               
               336-693, gnl|Mm7|chr2 (65160274-65159975)

	336-693, gnl\|bosTau2\|chr2 (23007720-23008072)
	336-693, gnl\|Hg17\|chr2 (165516195-165515827)
	336-693, gnl\|Mm7\|chr2 (65160274-65159975)