Non-Coding RNA Search

LyN1-MLN01A010021

Sequence:


               
               AAAACGGGTTCTTTTATTGCCACAGGCAGCAGGAAAGTGAACTTCTTGATGGAGAGAAGT
GTCTTCCCTAGTGAGAGCAAGTAAATTAGTTCTGAGGTCCTCTCACTCACTGTAGCTGTA
ATGAGAGAGACACCAGCCCTTCTTCATTAATGAGATGCCAATCACAAAGGGAGCAGCCTT
GGAGAGCCTTTGGGGAGGGGGTGGCTGGGGGAGCGCGGTGATTGGCACTGTAGCGAAAAG
GTAGGGAGCAGGAAAGAAGAGCCCCCTGAGGTGGGAGACGCACGTGAATGGTCTAGAATC
GGAGGGGCAGGTCTGGTGGGAGCTGGCAGTGTTCCTGAATGGGCACATCCATGCAGTTTA
TGGGCAACATCTCTGAAACCGAGCAGGAGAGCTGGGGAGCTGCCATCTGGCATATATCCC
CATAACGTGCTTCCTAAGGCAAGGATGCGATCACGCTAAGTGTGTCCCACATGGGGACTC
ATATGATTGGTGCCGGTTGGGGTGGGTTAATGATGGGCTCTCTTGGAAGGCTGGCAATCA
GCATATCTTGTCTCTCCTCTGCCTTAGAACTTGTCAAGGGTTTCATATACTGTGTAACTG
CCTAGACTTCAAAAAGGAAACTTTCAAAAAGATAGCTAAAGAGTGAGTTTCCGAGCTCCC
GTTGTAGCTCAGTGGGTTAAGAACCAACGTGAGGATGCTGGCTGGATTTCCGCCCTCGCT
CAGTGGGTTAGGGATCCATCCAGTGTTGCTGCAAGCTGCAGCGTAAATTTCAGATGCCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAACGGGTTCTTTTATTGCCACAGGCAGCAGGAAAGTGAACTTCTTGATGGAGAGAAGT
GTCTTCCCTAGTGAGAGCAAGTAAATTAGTTCTGAGGTCCTCTCACTCACTGTAGCTGTA
ATGAGAGAGACACCAGCCCTTCTTCATTAATGAGATGCCAATCACAAAGGGAGCAGCCTT
GGAGAGCCTTTGGGGAGGGGGTGGCTGGGGGAGCGCGGTGATTGGCACTGTAGCGAAAAG
GTAGGGAGCAGGAAAGAAGAGCCCCCTGAGGTGGGAGACGCACGTGAATGGTCTAGAATC
GGAGGGGCAGGTCTGGTGGGAGCTGGCAGTGTTCCTGAATGGGCACATCCATGCAGTTTA
TGGGCAACATCTCTGAAACCGAGCAGGAGAGCTGGGGAGCTGCCATCTGGCATATATCCC
CATAACGTGCTTCCTAAGGCAAGGATGCGATCACGCTAAGTGTGTCCCACATGGGGACTC
ATATGATTGGTGCCGGTTGGGGTGGGTTAATGATGGGCTCTCTTGGAAGGCTGGCAATCA
GCATATCTTGTCTCTCCTCTGCCTTAGAACTTGTCAAGGGTTTCATATACTGTGTAACTG
CCTAGACTTCAAAAAGGAAACTTTCAAAAAGATAGCTAAAGAGTGAGTTTCCGAGCTCCC
GTTGTAGCTCAGTGGGTTAAGAACCAACGTGAGGATGCTGGCTGGATTTCCGCCCTCGCT
CAGTGGGTTAGGGATCCATCCAGTGTTGCTGCAAGCTGCAGCGTAAATTTCAGATGCCAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               120-278, + strand, RNAz p=0.791643

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-278, + strand, RNAz p=0.791643

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-642, gnl|bosTau2|chr10 (37689878-37690502)
               

               
               1-642, gnl|Hg17|chr15 (58843555-58842922)
               

               
               1-642, gnl|Mm7|chr9 (69146233-69146868)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-642, gnl|bosTau2|chr10 (37689878-37690502)
               

               
               1-642, gnl|Hg17|chr15 (58843555-58842922)
               

               
               1-642, gnl|Mm7|chr9 (69146233-69146868)

	1-642, gnl\|bosTau2\|chr10 (37689878-37690502)
	1-642, gnl\|Hg17\|chr15 (58843555-58842922)
	1-642, gnl\|Mm7\|chr9 (69146233-69146868)