Non-Coding RNA Search

LyN1-MLN01A090021

Sequence:


               
               AGATCCTAATGATCCAAATAGAGAAATGGTTGTTCAACTACTAGATGATTTTAAAATATC
AGGAGTTAATGGAACACATATCTGCATGGTGTTTGAAGTTTTGGGCCATCATCTGCTCAA
GTGGATCATCAAGTCCAATTATCAAGGGCTTCCTCTGCCTTGTGTCAAAAAAAATTATTC
AGCAAGTATGTATCTTAGTATTTTCTATGTGGTAATTTTTTTAAGGTTATACTCCATTTA
TAGTCATTATAAAATATTGGTGATATTCCCTGTGTTGTACAGCATATCCTTGTAGCTTAT
TTTTTTTTTTTATACATGATAGTTTGTATGTGGTAGTTTTTTTAGATTCTTAAAGTGTCA
GGAGTTTCCTATTGTGAATAGAATTTTTATTTTTAAAACTCATTTTTTTAATTGCCGAAA
TTGTTTATTCACCTACTAGGGTTTATTGTGTTTATTCTGTCTTTAAATGTTTTAGCATAA
TCTTTTTTCCTAGATTCATCTTCTGTAATGATTATTTAGATAGGAAGCTGTGTGGAATGC
TTGATTTTGGAAATTTGGAGCCCTCATCCAAAAGTTCTGGATAGCAAAAATTGACTGTAT
ATTAATAGAGAGTTGTGCTGTCAAATTATTTCTTCGTCTTTATATAGTATTCATGGGGAT
TTTTTCTAGTCTAAACCACTTTCAATATAACGGTAAAAAAAGTTTACCATCAGAAAAATA
GTAAAACTTCAAGGGCAAATAATTTGTTTAGGTAATGTGTTTTGTTGGACTGAAGACCAA
GCTAGGAAGCAGAAAACCTTAGTTCCTCATCAACAAGGAAATTTGATTTAAAGACCCAAA
TCTGGAGTTCCCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATCCTAATGATCCAAATAGAGAAATGGTTGTTCAACTACTAGATGATTTTAAAATATC
AGGAGTTAATGGAACACATATCTGCATGGTGTTTGAAGTTTTGGGCCATCATCTGCTCAA
GTGGATCATCAAGTCCAATTATCAAGGGCTTCCTCTGCCTTGTGTCAAAAAAAATTATTC
AGCAAGTATGTATCTTAGTATTTTCTATGTGGTAATTTTTTTAAGGTTATACTCCATTTA
TAGTCATTATAAAATATTGGTGATATTCCCTGTGTTGTACAGCATATCCTTGTAGCTTAT
TTTTTTTTTTTATACATGATAGTTTGTATGTGGTAGTTTTTTTAGATTCTTAAAGTGTCA
GGAGTTTCCTATTGTGAATAGAATTTTTATTTTTAAAACTCATTTTTTTAATTGCCGAAA
TTGTTTATTCACCTACTAGGGTTTATTGTGTTTATTCTGTCTTTAAATGTTTTAGCATAA
TCTTTTTTCCTAGATTCATCTTCTGTAATGATTATTTAGATAGGAAGCTGTGTGGAATGC
TTGATTTTGGAAATTTGGAGCCCTCATCCAAAAGTTCTGGATAGCAAAAATTGACTGTAT
ATTAATAGAGAGTTGTGCTGTCAAATTATTTCTTCGTCTTTATATAGTATTCATGGGGAT
TTTTTCTAGTCTAAACCACTTTCAATATAACGGTAAAAAAAGTTTACCATCAGAAAAATA
GTAAAACTTCAAGGGCAAATAATTTGTTTAGGTAATGTGTTTTGTTGGACTGAAGACCAA
GCTAGGAAGCAGAAAACCTTAGTTCCTCATCAACAAGGAAATTTGATTTAAAGACCCAAA
TCTGGAGTTCCCAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               329-433, - strand, RNAz p=0.79392

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               329-433, - strand, RNAz p=0.79392

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               78-832, gnl|bosTau2|chr23 (7095380-7096109)
               

               
               78-832, gnl|Hg17|chr6 (35950094-35948826)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               78-832, gnl|bosTau2|chr23 (7095380-7096109)
               

               
               78-832, gnl|Hg17|chr6 (35950094-35948826)

	78-832, gnl\|bosTau2\|chr23 (7095380-7096109)
	78-832, gnl\|Hg17\|chr6 (35950094-35948826)