Non-Coding RNA Search

LyN1-MLN01A090028

Sequence:


               
               TATTAGGCTTAGAAAAATTACACAAATTCCTGAAGAACTAGTCCACTTATTGAATAATTC
TCTTTGAAAGTTTTTTTTTTTCCTGAGTAAAATACAGCTGTCCCAGTGTCCATTTGAAAA
GCTCTTAATATTATATCTTACCAATGTAATCAAGAGACCAAGTTCACATCTGCCCCCTTT
TTTTAGCATTACAGTTCTTTCACACATTTTGGTGTTACTTATTTCCACTCTGAGAGAAAA
CAGTGTTTGATTAATCAGTGTGTGTAATAGCCAGAGGAGGGAGGAAGCTGAACATGTCCA
AGGAAGAATTCTCATGGGAAATTCCACATTTATCGCAGGGCTTCCTGCCCAAAGCCCTTG
GGGTAAACTAGGCTTTCCTTATGTGCTATCTTCTGTGGTTAAATTGTCTCCCTGGATGAT
AGTTAACCTCAGTTAGAGCAGGCTAAATATCAGCAACAAATGTTTGACTTTTTTCCACTG
AAGCACAAGTGAGACTCTTATAAAAACACTTCAAGTTAGCTTCTGAACTTGGCTTCCACA
TCTATCAAATAGAGGTTGTGTTAACTACCTCATGGAGTTGCTCTAAGGTATTTGGGTCAT
TGCAGGGGCACAATAACTGTTGGTTCTCTTTCCACCTTCTCTTTCAAGTCTGTATTAAGC
ACTACTGAAAAAGAGAATTGGGAAGTAAGTTTTTATTCTTGCCAAACACCTAGGTATAAT
TTGTCCCTGAATGTCTTACATCTTCATACTAAGTTAAGTCTATGATGGATTTATCTCCTC
CTGAGGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTAGGCTTAGAAAAATTACACAAATTCCTGAAGAACTAGTCCACTTATTGAATAATTC
TCTTTGAAAGTTTTTTTTTTTCCTGAGTAAAATACAGCTGTCCCAGTGTCCATTTGAAAA
GCTCTTAATATTATATCTTACCAATGTAATCAAGAGACCAAGTTCACATCTGCCCCCTTT
TTTTAGCATTACAGTTCTTTCACACATTTTGGTGTTACTTATTTCCACTCTGAGAGAAAA
CAGTGTTTGATTAATCAGTGTGTGTAATAGCCAGAGGAGGGAGGAAGCTGAACATGTCCA
AGGAAGAATTCTCATGGGAAATTCCACATTTATCGCAGGGCTTCCTGCCCAAAGCCCTTG
GGGTAAACTAGGCTTTCCTTATGTGCTATCTTCTGTGGTTAAATTGTCTCCCTGGATGAT
AGTTAACCTCAGTTAGAGCAGGCTAAATATCAGCAACAAATGTTTGACTTTTTTCCACTG
AAGCACAAGTGAGACTCTTATAAAAACACTTCAAGTTAGCTTCTGAACTTGGCTTCCACA
TCTATCAAATAGAGGTTGTGTTAACTACCTCATGGAGTTGCTCTAAGGTATTTGGGTCAT
TGCAGGGGCACAATAACTGTTGGTTCTCTTTCCACCTTCTCTTTCAAGTCTGTATTAAGC
ACTACTGAAAAAGAGAATTGGGAAGTAAGTTTTTATTCTTGCCAAACACCTAGGTATAAT
TTGTCCCTGAATGTCTTACATCTTCATACTAAGTTAAGTCTATGATGGATTTATCTCCTC
CTGAGGGGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               294-447, + strand, RNAz p=0.882248

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               294-447, + strand, RNAz p=0.882248

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-780, gnl|bosTau2|chr4 (32655751-32654946)
               

               
               1-780, gnl|Hg17|chr7 (36864233-36862492)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-780, gnl|bosTau2|chr4 (32655751-32654946)
               

               
               1-780, gnl|Hg17|chr7 (36864233-36862492)

	1-780, gnl\|bosTau2\|chr4 (32655751-32654946)
	1-780, gnl\|Hg17\|chr7 (36864233-36862492)