Non-Coding RNA Search

LyN1-MLN01A110005

Sequence:


               
               ATGGCCCTCAGCTTAGATACCCCCGCCAGGATAAGCCTTTCTGAAGCAGATAAACTGATT
GCAGTGGAAGAGGATCAGCCTCCAGCTGCGATCTTCCCACACTGCTGCCTGTTTCACATT
CCAGCCCGCAGGCAGGTAGGTCCCTCTGCCAGGAGTGGGACCCATTTCATCAGCAAGATT
TATTCATTCATTATGGCTTAGACCCAGGGCCTGGGCTTTTTAGAGCCGGGGGCTCTGCCT
GGCTTTTCGAGTCATCCTAATACTTGGTAGCAGAGGCCACCCAAAGCCACAGATAGTTGC
TCACCTGAGAGAGAAGGATAGACAAACAGCATAATGATAAGAGTGCAGTCTTTTCTCAGT
TTGAGGTCTACCTCCACCTGTAAAAGTCTCAGATCTCCCTGGGGAAATTGCCGTCTTGAC
TCTTAGTTTGCTCATCTGTAAAATCAGGTAGTAAGTAAGTAGTACCCTTGAAAGAGATTT
TGTGCATTAACAGCTTCCCCCAGAACCAGCCTATCGTAGGTGCTTACTAAGCGCTGCTTA
TGAGTATCCAGCTGGGCCCTGAGCCCTGAGTAGGCACATGAGTGCTGGGCCTCTAGCCTG
TAGGGCATCAGGAAATGTGGGCTGAGAGTGAAGGTGTTGAGTGCTTTCCCGTTTGNAAAG
CCCAGTGATACACGCGGCTTCATTTCTTAAATTTCCAGCTTTGGCGTTTAAGGATCCATG
CAGGAGCCCTGTCTCTGCAAAGTGACGTTCGTTGCTTCCTTCCTTGATGTCCTCATCTGC
AGAATCCTATCAGCTCACATGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGCCCTCAGCTTAGATACCCCCGCCAGGATAAGCCTTTCTGAAGCAGATAAACTGATT
GCAGTGGAAGAGGATCAGCCTCCAGCTGCGATCTTCCCACACTGCTGCCTGTTTCACATT
CCAGCCCGCAGGCAGGTAGGTCCCTCTGCCAGGAGTGGGACCCATTTCATCAGCAAGATT
TATTCATTCATTATGGCTTAGACCCAGGGCCTGGGCTTTTTAGAGCCGGGGGCTCTGCCT
GGCTTTTCGAGTCATCCTAATACTTGGTAGCAGAGGCCACCCAAAGCCACAGATAGTTGC
TCACCTGAGAGAGAAGGATAGACAAACAGCATAATGATAAGAGTGCAGTCTTTTCTCAGT
TTGAGGTCTACCTCCACCTGTAAAAGTCTCAGATCTCCCTGGGGAAATTGCCGTCTTGAC
TCTTAGTTTGCTCATCTGTAAAATCAGGTAGTAAGTAAGTAGTACCCTTGAAAGAGATTT
TGTGCATTAACAGCTTCCCCCAGAACCAGCCTATCGTAGGTGCTTACTAAGCGCTGCTTA
TGAGTATCCAGCTGGGCCCTGAGCCCTGAGTAGGCACATGAGTGCTGGGCCTCTAGCCTG
TAGGGCATCAGGAAATGTGGGCTGAGAGTGAAGGTGTTGAGTGCTTTCCCGTTTGNAAAG
CCCAGTGATACACGCGGCTTCATTTCTTAAATTTCCAGCTTTGGCGTTTAAGGATCCATG
CAGGAGCCCTGTCTCTGCAAAGTGACGTTCGTTGCTTCCTTCCTTGATGTCCTCATCTGC
AGAATCCTATCAGCTCACATGTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               131-244, + strand, RNAz p=0.727268

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               131-244, + strand, RNAz p=0.727268

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               131-457, gnl|bosTau2|chr14 (6634686-6635014)
               

               
               131-457, gnl|Hg17|chr8 (128899862-128900197)
               

               
               131-457, gnl|Mm7|chr15 (62133872-62134186)
               


               
               529-710, gnl|bosTau2|chr14 (6635629-6635816)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               131-457, gnl|bosTau2|chr14 (6634686-6635014)
               

               
               131-457, gnl|Hg17|chr8 (128899862-128900197)
               

               
               131-457, gnl|Mm7|chr15 (62133872-62134186)
               


               
               529-710, gnl|bosTau2|chr14 (6635629-6635816)

	131-457, gnl\|bosTau2\|chr14 (6634686-6635014)
	131-457, gnl\|Hg17\|chr8 (128899862-128900197)
	131-457, gnl\|Mm7\|chr15 (62133872-62134186)

	529-710, gnl\|bosTau2\|chr14 (6635629-6635816)