Non-Coding RNA Search

LyN1-MLN01A120043

Sequence:


               
               AACCCACTAGAAGGTCAGCCTTTTAGTCCAGTTGGAAGCGCAGGATTATAATGAGGACTC
TTGCTTTAAGTGGAGGAGGTGAAAATACAAGATTCAGCAGGTGTTTTTTTTTAGCATTTT
TTATTTGCAGTTATATAAAACGTGCTTTAGGCAGCATTTTGCTTGGCATTAATGCCACAT
ATAATCTTAGTACCTCATATCATTTCCACGTTATTCACTGAGGAATAAATTGGTAAGAGG
AAACCTTTAAAGGAAACTACAGTTTTATGTTGTAGATAGTGAAATGGAATGGTTTTGAAA
TACTGACCCTTAAAAAATATCCCTATGTGCTAAATTAGTAAAGTGCATAAATCAGGAGAG
GGAGGCAGAGTTGGGTTTTTTGGTTTTGGTTTTTGTTTTTAATGTCTGGACTTAATATTG
TCTAGAATTGGCACCCCTGGCATGAAATTGATGGGAAGTATTGAAATTTTGGTACCTTTT
AAGATTTTGCTTTTATCACATGACTTTGGAGAATCCTCCCATCCTAAAAAATGTCTTGAT
AAGAAACAGTAAAATCAAAATGATGCTTTAAAAATGGTTATTAAGTCTTTTAGGCTCTGC
ACACCATTAAAAATGATAGAAACAGCAACCCCTCCTAGAAAATTGCACATGGACACAGAA
TTTTTCATCCAGTTAAAAGAGTTTCATGAAGCTCAAGAAGTCTATCTATTTCCCCAGGTT
CAGTACTCTTACTGGTAGAAAGGTTTTTTTTTCCCCCAAATAATGTTTTATCCCTGCCGC
CCAAATCCCTATGTCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCCACTAGAAGGTCAGCCTTTTAGTCCAGTTGGAAGCGCAGGATTATAATGAGGACTC
TTGCTTTAAGTGGAGGAGGTGAAAATACAAGATTCAGCAGGTGTTTTTTTTTAGCATTTT
TTATTTGCAGTTATATAAAACGTGCTTTAGGCAGCATTTTGCTTGGCATTAATGCCACAT
ATAATCTTAGTACCTCATATCATTTCCACGTTATTCACTGAGGAATAAATTGGTAAGAGG
AAACCTTTAAAGGAAACTACAGTTTTATGTTGTAGATAGTGAAATGGAATGGTTTTGAAA
TACTGACCCTTAAAAAATATCCCTATGTGCTAAATTAGTAAAGTGCATAAATCAGGAGAG
GGAGGCAGAGTTGGGTTTTTTGGTTTTGGTTTTTGTTTTTAATGTCTGGACTTAATATTG
TCTAGAATTGGCACCCCTGGCATGAAATTGATGGGAAGTATTGAAATTTTGGTACCTTTT
AAGATTTTGCTTTTATCACATGACTTTGGAGAATCCTCCCATCCTAAAAAATGTCTTGAT
AAGAAACAGTAAAATCAAAATGATGCTTTAAAAATGGTTATTAAGTCTTTTAGGCTCTGC
ACACCATTAAAAATGATAGAAACAGCAACCCCTCCTAGAAAATTGCACATGGACACAGAA
TTTTTCATCCAGTTAAAAGAGTTTCATGAAGCTCAAGAAGTCTATCTATTTCCCCAGGTT
CAGTACTCTTACTGGTAGAAAGGTTTTTTTTTCCCCCAAATAATGTTTTATCCCTGCCGC
CCAAATCCCTATGTCTGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               79-198, + strand, RNAz p=0.727633

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               79-198, + strand, RNAz p=0.727633

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-784, gnl|bosTau2|chr22 (24649011-24649767)
               

               
               1-784, gnl|Hg17|chr3 (71239826-71239066)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-784, gnl|bosTau2|chr22 (24649011-24649767)
               

               
               1-784, gnl|Hg17|chr3 (71239826-71239066)

	1-784, gnl\|bosTau2\|chr22 (24649011-24649767)
	1-784, gnl\|Hg17\|chr3 (71239826-71239066)