Non-Coding RNA Search

LyN1-MLN01B020083

Sequence:


               
               CAAATATCTCACAGTAAAAGATTAAGGGTGAATGGCTATCTTCCAGTTTTGGTGAATACT
CTCTCATGTGTAGCTTGTTCTTCCTTCCTTCTTTTCTTTCTTTCTTTTTTTTTTGCCACA
ACCtgtgtaagctccagggccagggatcaaacccgcatcacagcagtgaaccatccacta
cagtgaccacactggatccttaactcactcagccaccagggaactccATACCCTTTTCTT
TCAACTGGTCGTCCCGAAGAAATTATGGAACTCAAACATAAAACCAAGAAAAAGGCTTAT
TCATTGATCTGATTGCTTCTGTGAGTTTAGCAGCAGAACGTGTTGGCAGGGTCACTAACT
GTAATTCTCTGGAGGTGATTTCACGATTGCTGGTCGGGTCCATTCATGTCGTCCTTAATG
TCACCCTTCCTTGTGATTTATCTTTGCTTACCTGTATTGTTTTCACCTCTGAGTTTAGCA
AAATAAAAATTCTCTTCATTCCAAAGGCTTATCTCCCCACCAGAACAGAGGGACATTCTT
GCACATCCCCCACCCCCTCTGCTAGCTTGCGCACGTGCGAGCAATGAGTGAATGAAGACT
GCAGAAAAATCCAAAACGGTAGTGGTAAAAATCAAAGTCTCTTTTTAGTCTTGGAAACCT
CTTCCAAAAAAGAAATTGCTAAGCAAGACATTTCTGAAGGGCAGAAAGAACTATAGATAT
GAAATGAGAAGGCTTGGTTCTGGTCTCATCTCAGCCACGAACTCGCCTTTGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAATATCTCACAGTAAAAGATTAAGGGTGAATGGCTATCTTCCAGTTTTGGTGAATACT
CTCTCATGTGTAGCTTGTTCTTCCTTCCTTCTTTTCTTTCTTTCTTTTTTTTTTGCCACA
ACCtgtgtaagctccagggccagggatcaaacccgcatcacagcagtgaaccatccacta
cagtgaccacactggatccttaactcactcagccaccagggaactccATACCCTTTTCTT
TCAACTGGTCGTCCCGAAGAAATTATGGAACTCAAACATAAAACCAAGAAAAAGGCTTAT
TCATTGATCTGATTGCTTCTGTGAGTTTAGCAGCAGAACGTGTTGGCAGGGTCACTAACT
GTAATTCTCTGGAGGTGATTTCACGATTGCTGGTCGGGTCCATTCATGTCGTCCTTAATG
TCACCCTTCCTTGTGATTTATCTTTGCTTACCTGTATTGTTTTCACCTCTGAGTTTAGCA
AAATAAAAATTCTCTTCATTCCAAAGGCTTATCTCCCCACCAGAACAGAGGGACATTCTT
GCACATCCCCCACCCCCTCTGCTAGCTTGCGCACGTGCGAGCAATGAGTGAATGAAGACT
GCAGAAAAATCCAAAACGGTAGTGGTAAAAATCAAAGTCTCTTTTTAGTCTTGGAAACCT
CTTCCAAAAAAGAAATTGCTAAGCAAGACATTTCTGAAGGGCAGAAAGAACTATAGATAT
GAAATGAGAAGGCTTGGTTCTGGTCTCATCTCAGCCACGAACTCGCCTTTGCCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               659-755, - strand, RNAz p=0.962876

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               659-755, - strand, RNAz p=0.962876

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               286-755, gnl|bosTau2|chr4 (22613033-22613510)
               

               
               286-755, gnl|Hg17|chr7 (104902638-104902170)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               286-755, gnl|bosTau2|chr4 (22613033-22613510)
               

               
               286-755, gnl|Hg17|chr7 (104902638-104902170)

	286-755, gnl\|bosTau2\|chr4 (22613033-22613510)
	286-755, gnl\|Hg17\|chr7 (104902638-104902170)