Non-Coding RNA Search

LyN1-MLN01B020091

Sequence:


               
               ATTTGCGGCCGTCATGTCTTTGAGCTGAAGGGCCCTGTCAGCCGGGGGCCTCTCTTCTTT
CTTGTGTTTTTGGAATAAGGCCAGACCACCACCCTCTCCGTGAAGAAGAAGGTGGAACGC
CACGCTCACCCCTCACTTCCGGCGAGAAGGTAGAGGCTGGGGCCGCTGCAGGTTGGTCCA
TCAGCCGTCATTAACTGAGCATATACTACCTTTAAGGCCAGTGTAACTCTGGGAAGTCAT
CAGATGGGAAGGAGCTAGACAAGATTTCTGACCTCTCGGAGGAATATAACACATGCGATT
GCTTCAATCAAGTTTCTTGGTTGAAAACAAAATCGACCAGTTGTGTTACCAGCATAGGGC
ACTGGACGCCATCACAACTGGTTGCCACTAACATCCTGAAATTGAGTTTTTCTGCAGTCA
CTGTCACAGCCAGAAAATGCTCCTCCAAGTCCCCTGGACCGTCAGGTGGCTCTCACTGCC
CAGTCCTCAGTTGCAAAGAAAACTGCCTCAATAAGACGGAGGTATTTCCAAATGCAGGAA
AGAGGCTCTCTCAATACAGTTCACCCTGACTGGTAGCAGATATCCACGTAATCGAATTAA
GAAAAAGAGGGAAATCATTCAGAGGCTGAAGTTGACTCATTTCCAAATTCATGTAGGATG
ACTAATATTGATTTTCTAAGACTTCCTTAGTAAAATCTGTTTTATTAAAAACTTCTCTTA
ACAAAAATGTTTTATTTATTTATTTGCCGCAGCAGGCAGCAGCTTGATGTGGGATCCCAG
TTCCCAGACCAGGGACTGAACCTGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTGCGGCCGTCATGTCTTTGAGCTGAAGGGCCCTGTCAGCCGGGGGCCTCTCTTCTTT
CTTGTGTTTTTGGAATAAGGCCAGACCACCACCCTCTCCGTGAAGAAGAAGGTGGAACGC
CACGCTCACCCCTCACTTCCGGCGAGAAGGTAGAGGCTGGGGCCGCTGCAGGTTGGTCCA
TCAGCCGTCATTAACTGAGCATATACTACCTTTAAGGCCAGTGTAACTCTGGGAAGTCAT
CAGATGGGAAGGAGCTAGACAAGATTTCTGACCTCTCGGAGGAATATAACACATGCGATT
GCTTCAATCAAGTTTCTTGGTTGAAAACAAAATCGACCAGTTGTGTTACCAGCATAGGGC
ACTGGACGCCATCACAACTGGTTGCCACTAACATCCTGAAATTGAGTTTTTCTGCAGTCA
CTGTCACAGCCAGAAAATGCTCCTCCAAGTCCCCTGGACCGTCAGGTGGCTCTCACTGCC
CAGTCCTCAGTTGCAAAGAAAACTGCCTCAATAAGACGGAGGTATTTCCAAATGCAGGAA
AGAGGCTCTCTCAATACAGTTCACCCTGACTGGTAGCAGATATCCACGTAATCGAATTAA
GAAAAAGAGGGAAATCATTCAGAGGCTGAAGTTGACTCATTTCCAAATTCATGTAGGATG
ACTAATATTGATTTTCTAAGACTTCCTTAGTAAAATCTGTTTTATTAAAAACTTCTCTTA
ACAAAAATGTTTTATTTATTTATTTGCCGCAGCAGGCAGCAGCTTGATGTGGGATCCCAG
TTCCCAGACCAGGGACTGAACCTGGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               76-182, - strand, RNAz p=0.986808

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               76-182, - strand, RNAz p=0.986808

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-737, gnl|bosTau2|chr11 (52251817-52251080)
               

               
               1-737, gnl|Hg17|chr2 (27929888-27928848)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-737, gnl|bosTau2|chr11 (52251817-52251080)
               

               
               1-737, gnl|Hg17|chr2 (27929888-27928848)

	1-737, gnl\|bosTau2\|chr11 (52251817-52251080)
	1-737, gnl\|Hg17\|chr2 (27929888-27928848)