Non-Coding RNA Search

LyN1-MLN01B030080

Sequence:


               
               TTGTAATTTTGATGGAGGGCAGTACATCTTTAGGTTTCTATTCTTGGGCTCCATTATGCT
TGTTGTTGAGGAGCTGAGAAACTATAGATTTGGTTACATAGGAACAGAGATTCTCTCCCC
AAGAACTTTTCTTGTTTCCTTTCTTTCATCATTTACCAGACATGGTGCCCATGGGTTGGC
TGCCAGTATCTGGCCCAATATCTGTTCTTAAAAAATGTCGACGTCTGAAATGCAGAGATC
ATTCTTTCCTCACTTTTGTGTAAAGATAAATAAATCACACTAATCCCCAAGACATTTTAG
TTAGTAATCGTTTACTCATTTTGCAATAAGTAAGAGAAGGAAGGAAATCTAATTTTAAAA
TCTTGCTATTTTAGAAAAACAACCTCTCTCGGAGGAAATATTGTGTGGATGTAAGACAGT
ACATATTACCTTAATGTAGCCTCTCTAAAAATAAAGATGTGGCCTTTTTCTTTTCAGTTT
TGAAAAGTAATATCACTACCTCTTGTGTCTCTTAAAGTCTAAATCAGCTATTGATAGGAT
ATTTTTCCAGTGAAATTCCGAGACCCTAGTGTTATTTTATTCAAAACATATTACTTTTAG
GTGAGTTAAAGTTTTTTAAAAGCCCATATTAAAGGTCTTTTTAAAAGCACATAGTACATA
GACACTTAAGTAAAAGAGGAAAAGTAAAGATGGAGTANAACATGTCTTTCAAATTCCAAG
GTCTCTGCTNAATATTCAGAGCACAATGGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTAATTTTGATGGAGGGCAGTACATCTTTAGGTTTCTATTCTTGGGCTCCATTATGCT
TGTTGTTGAGGAGCTGAGAAACTATAGATTTGGTTACATAGGAACAGAGATTCTCTCCCC
AAGAACTTTTCTTGTTTCCTTTCTTTCATCATTTACCAGACATGGTGCCCATGGGTTGGC
TGCCAGTATCTGGCCCAATATCTGTTCTTAAAAAATGTCGACGTCTGAAATGCAGAGATC
ATTCTTTCCTCACTTTTGTGTAAAGATAAATAAATCACACTAATCCCCAAGACATTTTAG
TTAGTAATCGTTTACTCATTTTGCAATAAGTAAGAGAAGGAAGGAAATCTAATTTTAAAA
TCTTGCTATTTTAGAAAAACAACCTCTCTCGGAGGAAATATTGTGTGGATGTAAGACAGT
ACATATTACCTTAATGTAGCCTCTCTAAAAATAAAGATGTGGCCTTTTTCTTTTCAGTTT
TGAAAAGTAATATCACTACCTCTTGTGTCTCTTAAAGTCTAAATCAGCTATTGATAGGAT
ATTTTTCCAGTGAAATTCCGAGACCCTAGTGTTATTTTATTCAAAACATATTACTTTTAG
GTGAGTTAAAGTTTTTTAAAAGCCCATATTAAAGGTCTTTTTAAAAGCACATAGTACATA
GACACTTAAGTAAAAGAGGAAAAGTAAAGATGGAGTANAACATGTCTTTCAAATTCCAAG
GTCTCTGCTNAATATTCAGAGCACAATGGAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               122-217, - strand, RNAz p=0.954152

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               122-217, - strand, RNAz p=0.954152

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-577, gnl|bosTau2|chr7 (35175982-35176567)
               

               
               5-577, gnl|Hg17|chr5 (140688992-140689560)
               

               
               5-577, gnl|Mm7|chr18 (38034611-38037219)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-577, gnl|bosTau2|chr7 (35175982-35176567)
               

               
               5-577, gnl|Hg17|chr5 (140688992-140689560)
               

               
               5-577, gnl|Mm7|chr18 (38034611-38037219)

	5-577, gnl\|bosTau2\|chr7 (35175982-35176567)
	5-577, gnl\|Hg17\|chr5 (140688992-140689560)
	5-577, gnl\|Mm7\|chr18 (38034611-38037219)