Non-Coding RNA Search

LyN1-MLN01B060025

Sequence:


               
               CGTCTGGAAAAGCAGTGAAGGCTAGTCCAGGATGGATCTTGAGAAGATGAGCTGAGAAAT
ATGCTAGAGCTTGGTGTAGAGAGTGCTGGAGTAGGTAAGACATATAGAATAACCAAAATA
TGAATTCTTTGGACCCTTGTCCTCTCCAGCTTTATGGCCCCAGCCTCAGCACAATTTCTA
ACACACAGGAGTGCTCCTTTAGTGCTTGTTGAATCATTTATTTCAATAATGTTGACTGAA
GGCAAATGGCTGAGAACTACTATGGTTTTTACAGAATAAAGTAAAATTATAATCTGTGGA
AATAAAGCCCATGTGAACTATAACTCTGCTTCTTCGAATTTATGTATGATTTCTGTGCTT
AAAATTGTAAGAATATACAGTGAAGCCTTTGTGAATGTCATTGCTTTAAGGAAAGTGTTT
GAATTGGAATCAACAGTTTATTTTAAAATCTACAAAATATACAGAATACATTTGCCCCAG
CCCGGTTCTTTTCACCCCCATCCCCCACTAGGCCACCTGTCTTCCTTCTCTGGCTGCTTC
TCACCCCATCCTCTGCCCAAAGCCTTGCTGACATATTTCAGAGTCTTTCATTTGCATTCT
CTTCAAGGGCCTATATTAATTTGACATCAGCGGCATTACAATGCAGCATGGAGAGTAAAG
CACTGTTAATATTTATTATGATGCTTTGAGTTTACATTTACCTGAGGGAAGTTTCAAATG
CCTGCCTCATGCCCGTCTGCAGTAATCATCTATACCGAGGGCACGTCAGCTCTCTCTCCA
CATAGAGGAGGAGACCAAGACAATCTGGGTAGCTCTTCCCACCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTCTGGAAAAGCAGTGAAGGCTAGTCCAGGATGGATCTTGAGAAGATGAGCTGAGAAAT
ATGCTAGAGCTTGGTGTAGAGAGTGCTGGAGTAGGTAAGACATATAGAATAACCAAAATA
TGAATTCTTTGGACCCTTGTCCTCTCCAGCTTTATGGCCCCAGCCTCAGCACAATTTCTA
ACACACAGGAGTGCTCCTTTAGTGCTTGTTGAATCATTTATTTCAATAATGTTGACTGAA
GGCAAATGGCTGAGAACTACTATGGTTTTTACAGAATAAAGTAAAATTATAATCTGTGGA
AATAAAGCCCATGTGAACTATAACTCTGCTTCTTCGAATTTATGTATGATTTCTGTGCTT
AAAATTGTAAGAATATACAGTGAAGCCTTTGTGAATGTCATTGCTTTAAGGAAAGTGTTT
GAATTGGAATCAACAGTTTATTTTAAAATCTACAAAATATACAGAATACATTTGCCCCAG
CCCGGTTCTTTTCACCCCCATCCCCCACTAGGCCACCTGTCTTCCTTCTCTGGCTGCTTC
TCACCCCATCCTCTGCCCAAAGCCTTGCTGACATATTTCAGAGTCTTTCATTTGCATTCT
CTTCAAGGGCCTATATTAATTTGACATCAGCGGCATTACAATGCAGCATGGAGAGTAAAG
CACTGTTAATATTTATTATGATGCTTTGAGTTTACATTTACCTGAGGGAAGTTTCAAATG
CCTGCCTCATGCCCGTCTGCAGTAATCATCTATACCGAGGGCACGTCAGCTCTCTCTCCA
CATAGAGGAGGAGACCAAGACAATCTGGGTAGCTCTTCCCACCA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               161-268, + strand, RNAz p=0.890495

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               161-268, + strand, RNAz p=0.890495

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               161-824, gnl|bosTau2|chr1 (36293240-36293926)
               

               
               161-824, gnl|Hg17|chr3 (117617756-117617092)
               

               
               161-824, gnl|Mm7|chr16 (41276031-41276650)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               161-824, gnl|bosTau2|chr1 (36293240-36293926)
               

               
               161-824, gnl|Hg17|chr3 (117617756-117617092)
               

               
               161-824, gnl|Mm7|chr16 (41276031-41276650)

	161-824, gnl\|bosTau2\|chr1 (36293240-36293926)
	161-824, gnl\|Hg17\|chr3 (117617756-117617092)
	161-824, gnl\|Mm7\|chr16 (41276031-41276650)