Non-Coding RNA Search

LyN1-MLN01B060053

Sequence:


               
               AAAAATCTAGAAGCAAAAAAAGAGACTTGATTCAGCTGGATTCTTTTTTTTTTTTTTTTT
TTTCATTTGTAAGAGAGAATAGGCATGCACTTGAGCTCTGAGACTGTTTTCTGTTTGCAT
GTGTGAGCACTGGCCCAGAGGTGGGGAGTCTGGACTTTGGGGAATGAGTGGACTGGTCAG
AAATGGCCTGCAAGCCCATCCCAAATTAGGAGCAAAACAGAGGTACCTTTGGGGCTGTCG
ACTCTCATGTGGACTCCATTGGTCAACTTCGTCTGATCGTCTCTCTGGTTTACCAAGCAG
AGTTCTTGTAGTACCGAGGGTACAAAATGAAGCCCGAGTTCTGCCCCTTTCCAACCTTGA
ACAAATCATTTTAACTTCCTTGACCCTGCTTCCTCATCTATACAACAGAGATGTTATTAC
CTGGATAGATAACCTGACCAGTTGTTGTGAGGCTCAAAGGAGCTCATGAAAACACTTTAC
AAATAGTGTTTTGTTTGTTGTTCTACTGCTCCAAGGTAACTTGACATTGATATTTACCTT
CAATGGTTACTTTCAAGCATGTTGACACTTGTGGTTTTAAAGTGATTCTGAGTGGTTCTC
ATGCCAACATGTACCTTCCTATGAAAGTGTCTACTAACAATTGCATGAGGATACAATCCC
ATTCAACACACACAAACACATTAAACAGTTGCCTATTGATATGTTTGTGACTTTTTCCAC
ATAATTGGGTGGCCCACCTTTTCCTTGTTTCATAAAAACATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAATCTAGAAGCAAAAAAAGAGACTTGATTCAGCTGGATTCTTTTTTTTTTTTTTTTT
TTTCATTTGTAAGAGAGAATAGGCATGCACTTGAGCTCTGAGACTGTTTTCTGTTTGCAT
GTGTGAGCACTGGCCCAGAGGTGGGGAGTCTGGACTTTGGGGAATGAGTGGACTGGTCAG
AAATGGCCTGCAAGCCCATCCCAAATTAGGAGCAAAACAGAGGTACCTTTGGGGCTGTCG
ACTCTCATGTGGACTCCATTGGTCAACTTCGTCTGATCGTCTCTCTGGTTTACCAAGCAG
AGTTCTTGTAGTACCGAGGGTACAAAATGAAGCCCGAGTTCTGCCCCTTTCCAACCTTGA
ACAAATCATTTTAACTTCCTTGACCCTGCTTCCTCATCTATACAACAGAGATGTTATTAC
CTGGATAGATAACCTGACCAGTTGTTGTGAGGCTCAAAGGAGCTCATGAAAACACTTTAC
AAATAGTGTTTTGTTTGTTGTTCTACTGCTCCAAGGTAACTTGACATTGATATTTACCTT
CAATGGTTACTTTCAAGCATGTTGACACTTGTGGTTTTAAAGTGATTCTGAGTGGTTCTC
ATGCCAACATGTACCTTCCTATGAAAGTGTCTACTAACAATTGCATGAGGATACAATCCC
ATTCAACACACACAAACACATTAAACAGTTGCCTATTGATATGTTTGTGACTTTTTCCAC
ATAATTGGGTGGCCCACCTTTTCCTTGTTTCATAAAAACATG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               405-522, + strand, RNAz p=0.782539

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               405-522, + strand, RNAz p=0.782539

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               475-586, + strand, RNAmicro p=0.992831

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               475-586, + strand, RNAmicro p=0.992831

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               43-228, gnl|bosTau2|chr14 (27866104-27866289)
               


               
               326-762, gnl|bosTau2|chr14 (27866786-27867239)
               

               
               326-762, gnl|Hg17|chr8 (118882782-118882333)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               43-228, gnl|bosTau2|chr14 (27866104-27866289)
               


               
               326-762, gnl|bosTau2|chr14 (27866786-27867239)
               

               
               326-762, gnl|Hg17|chr8 (118882782-118882333)

	43-228, gnl\|bosTau2\|chr14 (27866104-27866289)

	326-762, gnl\|bosTau2\|chr14 (27866786-27867239)
	326-762, gnl\|Hg17\|chr8 (118882782-118882333)