Non-Coding RNA Search

LyN1-MLN01B070037

Sequence:


               
               AGTACTCTGTGGGTATTTTATGGACTGAAACTTAGGAAAGTAAATTGTGAAAAGGAACAT
TTATCATTCTGTACTGTAATGAGGTCAAACAAAGGAATCCTACAGTCGTTTTATTGTTCA
GTGACTGTAGATGAGCAATTCATTCTATGGAGTTCAATTCAGCTAGTGTTGATTGAACAC
CTAGTGTGCGAGATGCCGAGGGCAAGTGAACGGTGGCGCTAAAGAATGTAAAGATTAACA
AGACGGTCCCTGCCTTGGAGAGCCTGGGCACTAACGAACAGAATGAGGACATTCCTAACT
CCAGTGCATGGCAGAACGTGGAAGGCGTCGTGAGAGAAATACAGATAGGGTGCCATGGAG
ATTTCAGGAGAACACCATCTCATCCTGTTGGGAACTGGAACAAGAATCTTTGCAAAAGAT
GGACTTTGAGGGAATATGTGTAACTTGGGCAGCTGGAGATGGGTGAGGATTGTTGGGTTC
CTCAGAAGAAAGAAATGCTGAGGGGAAAGGGCTGGGTGCATGTGGTGACCAGCAGGAAGT
CTGTTGTTACCAAATTGCAGGAATCCAAGAGAGAGATTGTAGGGAAGGCTGTACTTAGGA
ATCCTCTGAAGGCTGGGAGCAGAAGGGGGGTGACAGGAGCATCCTCCGGTCTTTGCCCAT
ACACCATGGCCCCTCGGCCACCACCTTTCTCTAATCCTTCTAGTCACTTTTCTCTGTCTA
CTCCAGCCAGTAGGACACATCCTTCTTTCCTCTGCTGCCTTCTCAGTCTATCTCTCCTTC
CTCAGCTCTCAGAATCAGCTCAGAAGTCATCATCTCTGGGAGCACCCTGAGCCCTATAGA
TGGAATTAATCATTACTTTCTCTGTCCCCACAGTGATTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTACTCTGTGGGTATTTTATGGACTGAAACTTAGGAAAGTAAATTGTGAAAAGGAACAT
TTATCATTCTGTACTGTAATGAGGTCAAACAAAGGAATCCTACAGTCGTTTTATTGTTCA
GTGACTGTAGATGAGCAATTCATTCTATGGAGTTCAATTCAGCTAGTGTTGATTGAACAC
CTAGTGTGCGAGATGCCGAGGGCAAGTGAACGGTGGCGCTAAAGAATGTAAAGATTAACA
AGACGGTCCCTGCCTTGGAGAGCCTGGGCACTAACGAACAGAATGAGGACATTCCTAACT
CCAGTGCATGGCAGAACGTGGAAGGCGTCGTGAGAGAAATACAGATAGGGTGCCATGGAG
ATTTCAGGAGAACACCATCTCATCCTGTTGGGAACTGGAACAAGAATCTTTGCAAAAGAT
GGACTTTGAGGGAATATGTGTAACTTGGGCAGCTGGAGATGGGTGAGGATTGTTGGGTTC
CTCAGAAGAAAGAAATGCTGAGGGGAAAGGGCTGGGTGCATGTGGTGACCAGCAGGAAGT
CTGTTGTTACCAAATTGCAGGAATCCAAGAGAGAGATTGTAGGGAAGGCTGTACTTAGGA
ATCCTCTGAAGGCTGGGAGCAGAAGGGGGGTGACAGGAGCATCCTCCGGTCTTTGCCCAT
ACACCATGGCCCCTCGGCCACCACCTTTCTCTAATCCTTCTAGTCACTTTTCTCTGTCTA
CTCCAGCCAGTAGGACACATCCTTCTTTCCTCTGCTGCCTTCTCAGTCTATCTCTCCTTC
CTCAGCTCTCAGAATCAGCTCAGAAGTCATCATCTCTGGGAGCACCCTGAGCCCTATAGA
TGGAATTAATCATTACTTTCTCTGTCCCCACAGTGATTGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               469-579, + strand, RNAz p=0.982722

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               469-579, + strand, RNAz p=0.982722

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               6-579, gnl|bosTau2|chr8 (44681292-44680735)
               

               
               6-579, gnl|Hg17|chr9 (95025417-95024854)
               


               
               357-546, gnl|bosTau2|chr15 (5537413-5537225)
               

               
               357-546, gnl|Hg17|chr9 (95025081-95024887)
               


               
               580-880, gnl|bosTau2|chr8 (44680698-44680407)
               

               
               580-880, gnl|Hg17|chr9 (95024818-95024551)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-579, gnl|bosTau2|chr8 (44681292-44680735)
               

               
               6-579, gnl|Hg17|chr9 (95025417-95024854)
               


               
               357-546, gnl|bosTau2|chr15 (5537413-5537225)
               

               
               357-546, gnl|Hg17|chr9 (95025081-95024887)
               


               
               580-880, gnl|bosTau2|chr8 (44680698-44680407)
               

               
               580-880, gnl|Hg17|chr9 (95024818-95024551)

	6-579, gnl\|bosTau2\|chr8 (44681292-44680735)
	6-579, gnl\|Hg17\|chr9 (95025417-95024854)

	357-546, gnl\|bosTau2\|chr15 (5537413-5537225)
	357-546, gnl\|Hg17\|chr9 (95025081-95024887)

	580-880, gnl\|bosTau2\|chr8 (44680698-44680407)
	580-880, gnl\|Hg17\|chr9 (95024818-95024551)