Non-Coding RNA Search

LyN1-MLN01B080092

Sequence:


               
               AACACAAACAAATGCCAAACGAGTTCTCTACTGGCTTAGCAGTTAAGGATTTGGCATTGT
CACTGCTATGGCTCAGAGTTCAGTCCCTGGCTTGGGAACACTAACATGCCACTAAAAAGG
GAAAAAAAAAATGCTCACTGAATTAAGAAAGAGAATTGATCTCAGcaaagaccaaaatca
catgattatcccaaaagttacagaaaaagcattagacaaaattcgacataataaaaaaac
tctcatcaaaatggctatcgagaggagttcccttggtggctcagtggttaacaaacccaa
ctaggatcatgaagatgcgggttcgatccctggccttgctcaggaggtttaggatccatt
gttgccataggccataggccgacatctgtagctccaattctgcccctagcctggaaactt
ccatatgcttcaggtgtggcccANAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGT
ATTGAGAGAATATATCTCAACATAACCTAGGCCATTTAACACAAATCCACACACACAGCC
AATGTAATAACTCacggtgaaaagctgaaagctttcccactaaattcaggaacaagacaa
ggatgcccaccctcacggattctatttaacatagtgttggaagtcctggccacagcagtc
agacaaaaagaaaagaaagctatccaaattggaaggaacaaggtaaaactgtcactATTC
A

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACACAAACAAATGCCAAACGAGTTCTCTACTGGCTTAGCAGTTAAGGATTTGGCATTGT
CACTGCTATGGCTCAGAGTTCAGTCCCTGGCTTGGGAACACTAACATGCCACTAAAAAGG
GAAAAAAAAAATGCTCACTGAATTAAGAAAGAGAATTGATCTCAGcaaagaccaaaatca
catgattatcccaaaagttacagaaaaagcattagacaaaattcgacataataaaaaaac
tctcatcaaaatggctatcgagaggagttcccttggtggctcagtggttaacaaacccaa
ctaggatcatgaagatgcgggttcgatccctggccttgctcaggaggtttaggatccatt
gttgccataggccataggccgacatctgtagctccaattctgcccctagcctggaaactt
ccatatgcttcaggtgtggcccANAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGT
ATTGAGAGAATATATCTCAACATAACCTAGGCCATTTAACACAAATCCACACACACAGCC
AATGTAATAACTCacggtgaaaagctgaaagctttcccactaaattcaggaacaagacaa
ggatgcccaccctcacggattctatttaacatagtgttggaagtcctggccacagcagtc
agacaaaaagaaaagaaagctatccaaattggaaggaacaaggtaaaactgtcactATTC
A

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|57106072|ref|XP_534756.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57106072|ref|XP_534756.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               460-578, - strand, RNAz p=0.900468

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               460-578, - strand, RNAz p=0.900468

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               455-721, gnl|bosTau2|chr18 (29070671-29070934)
               


               
               460-719, gnl|bosTau2|chr10 (48745610-48745354)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               455-721, gnl|bosTau2|chr18 (29070671-29070934)
               


               
               460-719, gnl|bosTau2|chr10 (48745610-48745354)

	455-721, gnl\|bosTau2\|chr18 (29070671-29070934)

	460-719, gnl\|bosTau2\|chr10 (48745610-48745354)