LyN1-MLN01B100006
|
GTGGAGTTACCATCACAgcgcaacagaaacaaatccaactaggaaccctgaggtttcggg
ttcaatccttggcctcgctcagtgggttaaggatctggcgttggctgtgaactgtggtgt
aggtcacatgtgtagctccaggtctagtgtggctgtagctgtggctgtggccggcagctg
tatagctctgattggaccccgagcctgggaacttccatatgcgtgggtgtggccctAAAA
AGCAAAAAAAAGAAAAATAAAATAGTGCGCTAGCCGGAGAGGGCCTTGGGAAACATCCTT
GGCAAGCCCCCTCATTGTACAGATGAGGAAATGGGAAGGCAAAGAGGGGTGGAGAGTTCA
CACAACTCCTCTGATCTCTGGGTCAGTGGCCTCCCCCGCTCCCGGGATGCTCAGCTCTTG
AAATAACTCATCTGGATCTTCCCTTCTGACTCTGCAGGGCAAAGCATGTCTGCCCAGAGA
CTTAACCTCTTATTCCCCCTCCCTGAATCTCTTTTTTTTCTTCTTTTTTTGGCTGCTCTG
AGGCATATGGCGTTCCCGGGCCAGGGATCAGATGTGAGCTAGTCTGAATCCTTAACCCGC
AGTGGAAGGCCAGGAATGGAACCTGTGTCCCAGAGCTCCCTAGAAAACACTGATCCCcgg
ttaacaaactcaactagcatccatgaggactcaggttcgatccctggcctcgctcagtgg
gttaaggatctggcattgccatgagctgtgatgtgggtcacagacgtggct
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTGGAGTTACCATCACAgcgcaacagaaacaaatccaactaggaaccctgaggtttcggg
ttcaatccttggcctcgctcagtgggttaaggatctggcgttggctgtgaactgtggtgt
aggtcacatgtgtagctccaggtctagtgtggctgtagctgtggctgtggccggcagctg
tatagctctgattggaccccgagcctgggaacttccatatgcgtgggtgtggccctAAAA
AGCAAAAAAAAGAAAAATAAAATAGTGCGCTAGCCGGAGAGGGCCTTGGGAAACATCCTT
GGCAAGCCCCCTCATTGTACAGATGAGGAAATGGGAAGGCAAAGAGGGGTGGAGAGTTCA
CACAACTCCTCTGATCTCTGGGTCAGTGGCCTCCCCCGCTCCCGGGATGCTCAGCTCTTG
AAATAACTCATCTGGATCTTCCCTTCTGACTCTGCAGGGCAAAGCATGTCTGCCCAGAGA
CTTAACCTCTTATTCCCCCTCCCTGAATCTCTTTTTTTTCTTCTTTTTTTGGCTGCTCTG
AGGCATATGGCGTTCCCGGGCCAGGGATCAGATGTGAGCTAGTCTGAATCCTTAACCCGC
AGTGGAAGGCCAGGAATGGAACCTGTGTCCCAGAGCTCCCTAGAAAACACTGATCCCcgg
ttaacaaactcaactagcatccatgaggactcaggttcgatccctggcctcgctcagtgg
gttaaggatctggcattgccatgagctgtgatgtgggtcacagacgtggct
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
249-514, gnl|bosTau2|chr3 (362061-362321) |
|
249-514, gnl|canFam2|chr7 (33759404-33759121) |
|
249-514, gnl|dasNov1|scaffold_26894 (490-808) |
|
249-514, gnl|hg17|chr1 (164363694-164364007) |
|
249-514, gnl|Hg17|chr1 (164363844-164364096) |
|
249-514, gnl|loxAfr1|scaffold_175030 (4384-4141) |
|
249-514, gnl|monDom2|scaffold_16 (18520849-18521213) |
|
249-514, gnl|oryCun1|scaffold_191491 (10752-10443) |
|
249-514, gnl|panTro1|chr1 (146617536-146617849) |
|
249-514, gnl|rheMac2|chr1 (197398946-197399262) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
249-514, gnl|bosTau2|chr3 (362061-362321) |
|
249-514, gnl|canFam2|chr7 (33759404-33759121) |
|
249-514, gnl|dasNov1|scaffold_26894 (490-808) |
|
249-514, gnl|hg17|chr1 (164363694-164364007) |
|
249-514, gnl|Hg17|chr1 (164363844-164364096) |
|
249-514, gnl|loxAfr1|scaffold_175030 (4384-4141) |
|
249-514, gnl|monDom2|scaffold_16 (18520849-18521213) |
|
249-514, gnl|oryCun1|scaffold_191491 (10752-10443) |
|
249-514, gnl|panTro1|chr1 (146617536-146617849) |
|
249-514, gnl|rheMac2|chr1 (197398946-197399262) |
