Non-Coding RNA Search

LyN1-MLN01B120057

Sequence:


               
               AGTCTTTCCAAGAACCCTTGCCGTGGACTTCTCTCCCGCTTGCGCGCGCGGGGAAACTGA
GGCACAGGGACCAGCCACTGCCTCCTTTCGCTGGCACATGGGTTCATTCCTCCCCATCCG
ACCCGATGACAGAAACGGAGCCGTGCTGGAATCCTCTGGGGTTAGGTGAGCATCTCTGTT
CTTCCCCGGGCGTCCAGAGTGACTTAATGTCTCTTTACCTCAGTTTACCTATCTGTGAAA
TAGGGCGAAAGGCGCTAGTCGCCCCGCCAGCCGGCCGGGCTTTTGCAAGGTAGTATGTTG
GCTGATGGACTCTTGTTTTTAAGGGTAGACACGCCAGGCTCAGGGGGTGCCTCGCTTCTC
CTTGTTTTTGGATACTAAGCCAGCCGGATCCCCACCCCCTTCTCCAACATTGGCAGTCTC
CGGCATCCACGAGGGTCTCTGGGAGGGGGAGCCACACTCTCCGTCCCCCGCTGGGAGCGC
CTCGCCGCCTTCCGATTGGCCCAGACGATCCTAGAGCCTTCTGCCATTGGTTGCGGGCTC
CCTGATCCCCATTGGCTGGCGCCTGTTGTGACGTCATGGACCCATGTGGGAGCGCCGCGG
ATGGATTGGCTGGCGCGCCCAGCCNACCACCGCGGAGAAAGGAATTTCCACAGTAGCTGA
GGCGGCGAGGCTGATTTAAGGTGGTCTGAACAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTCTTTCCAAGAACCCTTGCCGTGGACTTCTCTCCCGCTTGCGCGCGCGGGGAAACTGA
GGCACAGGGACCAGCCACTGCCTCCTTTCGCTGGCACATGGGTTCATTCCTCCCCATCCG
ACCCGATGACAGAAACGGAGCCGTGCTGGAATCCTCTGGGGTTAGGTGAGCATCTCTGTT
CTTCCCCGGGCGTCCAGAGTGACTTAATGTCTCTTTACCTCAGTTTACCTATCTGTGAAA
TAGGGCGAAAGGCGCTAGTCGCCCCGCCAGCCGGCCGGGCTTTTGCAAGGTAGTATGTTG
GCTGATGGACTCTTGTTTTTAAGGGTAGACACGCCAGGCTCAGGGGGTGCCTCGCTTCTC
CTTGTTTTTGGATACTAAGCCAGCCGGATCCCCACCCCCTTCTCCAACATTGGCAGTCTC
CGGCATCCACGAGGGTCTCTGGGAGGGGGAGCCACACTCTCCGTCCCCCGCTGGGAGCGC
CTCGCCGCCTTCCGATTGGCCCAGACGATCCTAGAGCCTTCTGCCATTGGTTGCGGGCTC
CCTGATCCCCATTGGCTGGCGCCTGTTGTGACGTCATGGACCCATGTGGGAGCGCCGCGG
ATGGATTGGCTGGCGCGCCCAGCCNACCACCGCGGAGAAAGGAATTTCCACAGTAGCTGA
GGCGGCGAGGCTGATTTAAGGTGGTCTGAACAATC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               515-634, - strand, RNAz p=0.75887

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               515-634, - strand, RNAz p=0.75887

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-694, gnl|bosTau2|chr7 (16539592-16538885)
               

               
               1-694, gnl|Hg17|chr19 (2987261-2986579)
               

               
               1-694, gnl|Mm7|chr10 (81365926-81366689)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-694, gnl|bosTau2|chr7 (16539592-16538885)
               

               
               1-694, gnl|Hg17|chr19 (2987261-2986579)
               

               
               1-694, gnl|Mm7|chr10 (81365926-81366689)

	1-694, gnl\|bosTau2\|chr7 (16539592-16538885)
	1-694, gnl\|Hg17\|chr19 (2987261-2986579)
	1-694, gnl\|Mm7\|chr10 (81365926-81366689)