Non-Coding RNA Search

LyN1-MLN01C030075

Sequence:


               
               TTTCTGCGGATCCATTTGTAAACTCCCCAAGTATATTAGCTCTTGGTGTCTTGTCCCCCT
GAACTTTCTCCCATGTATTATTATGTGCCTATAGTTCTCTCTAGAGAGAGAAGCCTGTGG
ATGTCGAGTAAGAAGTCTCTGAAggaggtcccgacgtggtgcagcagtaacgaacccagc
tgatatccatgaggacttgggttcgatccctggccttgctcagtgggttaaggatccggt
gctgccgggatctgtggtgttggtcacagatgcaacttggatcctgcgttgctgtggctg
tggcatagaccagcagcaacagctctgatttgacccctagcctggaaaactccatatgcc
gcaggtgtgaccctaaaaagCACACACACACACACACACAAAGTCTCTAAAGACCCGTTA
GTGGAATAGGTACCTGTGCACCTGACTTCTGCTTTGGTGGTAGCAGGGGCTTTTAAACAG
ACCCAAAATTTCGGATCtccttggtggctcagtgggttaagaatccagcattgtcactgc
tgtggcacgagtttgatccctggcccaggaacttccgcatgctgtgggtgcagccAAAAA
AAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTGCGGATCCATTTGTAAACTCCCCAAGTATATTAGCTCTTGGTGTCTTGTCCCCCT
GAACTTTCTCCCATGTATTATTATGTGCCTATAGTTCTCTCTAGAGAGAGAAGCCTGTGG
ATGTCGAGTAAGAAGTCTCTGAAggaggtcccgacgtggtgcagcagtaacgaacccagc
tgatatccatgaggacttgggttcgatccctggccttgctcagtgggttaaggatccggt
gctgccgggatctgtggtgttggtcacagatgcaacttggatcctgcgttgctgtggctg
tggcatagaccagcagcaacagctctgatttgacccctagcctggaaaactccatatgcc
gcaggtgtgaccctaaaaagCACACACACACACACACACAAAGTCTCTAAAGACCCGTTA
GTGGAATAGGTACCTGTGCACCTGACTTCTGCTTTGGTGGTAGCAGGGGCTTTTAAACAG
ACCCAAAATTTCGGATCtccttggtggctcagtgggttaagaatccagcattgtcactgc
tgtggcacgagtttgatccctggcccaggaacttccgcatgctgtgggtgcagccAAAAA
AAAAAAAAAAAAAAAA

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               498-571, tRNA Pseudo, RaveNnA Score=28.06

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               498-571, tRNA Pseudo, RaveNnA Score=28.06