Non-Coding RNA Search

LyN1-MLN01C070048

Sequence:


               
               atatataccacttcttcctaatccagtcatctgtcgatggacatttgggttgtttccgtg
tcctggctattgtgaagagggctgcaatgaacatgcgggtgcatgtgtctcttttaagta
gagttttgtctggatagatgcccaagagtgggattgcggggtcatatggaagttctatgt
atagatttctaaggtatctccaaactgttctccatagtggctgtaccagtttacattccc
accagcagtgcaggagggttcccttttctccacagcccctccagcacttgttatttgtgg
atttattaatgatggccattctgactggtgtgaggtggtatctcatggtagttttgattt
gcatttctcttataatcagcaatgttgagcattttttcatgtgtttgttggccatctTGA
AGTGTATTCTAAAATTTGCTTTGATTTCTGTCAGTGCTAAATAGAGATCTTTGTTTTAGG
GATTGGTCTTCAGAAAGGAAAGATACCACCTTAGTCTAGCAATACAGGAAGTGTATATAG
TGCCCCATTTCCCCTTTTCTTGGGGATCAAATGGGGTGTGCAGGATAAGTGGGCACAAGA
ATCAGTGCATTATTATAAGTACGCATGCTTAATTATGATTTATGGGCTTTATAATCTCTT
ACAGCATAGAAATGAAAGTTTATTTACCTTTAGCAAAGAAAGAAGAGAAAAAAAGTACAA
AAATGGGTAATTTAAAATACACTTAAGAGTTTTCCTTAGAACATAGATCAAAATGTGAAC
ATGAATGTAAACACTGACATTTCTTCATGGTGTCTAAGATACCTATTAGCACACCTTTTT
GTGGTGTAAACTTCAGTATCTCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               atatataccacttcttcctaatccagtcatctgtcgatggacatttgggttgtttccgtg
tcctggctattgtgaagagggctgcaatgaacatgcgggtgcatgtgtctcttttaagta
gagttttgtctggatagatgcccaagagtgggattgcggggtcatatggaagttctatgt
atagatttctaaggtatctccaaactgttctccatagtggctgtaccagtttacattccc
accagcagtgcaggagggttcccttttctccacagcccctccagcacttgttatttgtgg
atttattaatgatggccattctgactggtgtgaggtggtatctcatggtagttttgattt
gcatttctcttataatcagcaatgttgagcattttttcatgtgtttgttggccatctTGA
AGTGTATTCTAAAATTTGCTTTGATTTCTGTCAGTGCTAAATAGAGATCTTTGTTTTAGG
GATTGGTCTTCAGAAAGGAAAGATACCACCTTAGTCTAGCAATACAGGAAGTGTATATAG
TGCCCCATTTCCCCTTTTCTTGGGGATCAAATGGGGTGTGCAGGATAAGTGGGCACAAGA
ATCAGTGCATTATTATAAGTACGCATGCTTAATTATGATTTATGGGCTTTATAATCTCTT
ACAGCATAGAAATGAAAGTTTATTTACCTTTAGCAAAGAAAGAAGAGAAAAAAAGTACAA
AAATGGGTAATTTAAAATACACTTAAGAGTTTTCCTTAGAACATAGATCAAAATGTGAAC
ATGAATGTAAACACTGACATTTCTTCATGGTGTCTAAGATACCTATTAGCACACCTTTTT
GTGGTGTAAACTTCAGTATCTCCA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|56590|emb|CAA37647.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|56590|emb|CAA37647.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               192-431, + strand, RNAz p=0.968782

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               192-431, + strand, RNAz p=0.968782

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               32-452, gnl|bosTau2|chr11 (27660867-27660456)
               


               
               585-864, gnl|bosTau2|chr8 (16716771-16717033)
               

               
               585-864, gnl|Hg17|chr9 (7786144-7785868)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               32-452, gnl|bosTau2|chr11 (27660867-27660456)
               


               
               585-864, gnl|bosTau2|chr8 (16716771-16717033)
               

               
               585-864, gnl|Hg17|chr9 (7786144-7785868)

	32-452, gnl\|bosTau2\|chr11 (27660867-27660456)

	585-864, gnl\|bosTau2\|chr8 (16716771-16717033)
	585-864, gnl\|Hg17\|chr9 (7786144-7785868)