Non-Coding RNA Search

LyN1-MLN01C080040

Sequence:


               
               CTGGAGGTTAGATGGTCTAAAATGTTCATATTTAGCCACATTTCCACATTCACCTGTTCA
TTTGTGTTATGTTTTGCTTTTCCACATTCACCTGTTCATTTGTGTTATGTTTTGCTTTTT
AATGTTCAAGTCTTGGCAAGCACAGCCAATTCTATAGAAACAAGTTATTTACTTTAACTC
CTAGTATAAAAATAAAAGGAGCTTTTGAGTCAGAAATTCAGAAACTTGCCAGGACCTGTT
TGGAAATAAGCCCTGAGGATTTGTTGTGTCAGTGGTTGGTTATGCAATGTCTGTGAGAAG
CACAGGAAGCTAAAAGACCAAACAAACCTTAAAAAGGAAGAAACGGAAAAAGCAGTTAAT
TATTATATATTGTTTGTTATAGATGAAACCATATAGCTTACTTTAAAGTCATATGATTTC
TGGCCTAGATAGTTCAGTGTTTAGAAGAGGTCCTTGCTGTTCTTTGCTGAAGCAGGGCTC
TTTTCTTTCAGGGCCTTTAGGATAGGAAAGCTTATTATTTTTGTGAGATGAGAAAGGCCT
ATTTTCCCACCTGATGTTCTAGAAAAAGAAGAGGTTATTTAGTCCTCACCAGAAGATGCT
TTGAATTCAGGTAATAATTCAGAAAATCATAACATCAGTGATTAACCCTAAAGAAGAAAA
CTGTTTACAGCCATTATTACATGCAGAGGGCTAATATTTTTTTTCCTTCtcttttttggc
cgccccatggcatatggagtacctgggctagggatcagatctgagctgtagttgcaacct
aTACCAGTTTGCACCAGCGATCAAACCTGACTGTGCCTGGCCGGGGGTGAAACCTGCATT
CTAGCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGAGGTTAGATGGTCTAAAATGTTCATATTTAGCCACATTTCCACATTCACCTGTTCA
TTTGTGTTATGTTTTGCTTTTCCACATTCACCTGTTCATTTGTGTTATGTTTTGCTTTTT
AATGTTCAAGTCTTGGCAAGCACAGCCAATTCTATAGAAACAAGTTATTTACTTTAACTC
CTAGTATAAAAATAAAAGGAGCTTTTGAGTCAGAAATTCAGAAACTTGCCAGGACCTGTT
TGGAAATAAGCCCTGAGGATTTGTTGTGTCAGTGGTTGGTTATGCAATGTCTGTGAGAAG
CACAGGAAGCTAAAAGACCAAACAAACCTTAAAAAGGAAGAAACGGAAAAAGCAGTTAAT
TATTATATATTGTTTGTTATAGATGAAACCATATAGCTTACTTTAAAGTCATATGATTTC
TGGCCTAGATAGTTCAGTGTTTAGAAGAGGTCCTTGCTGTTCTTTGCTGAAGCAGGGCTC
TTTTCTTTCAGGGCCTTTAGGATAGGAAAGCTTATTATTTTTGTGAGATGAGAAAGGCCT
ATTTTCCCACCTGATGTTCTAGAAAAAGAAGAGGTTATTTAGTCCTCACCAGAAGATGCT
TTGAATTCAGGTAATAATTCAGAAAATCATAACATCAGTGATTAACCCTAAAGAAGAAAA
CTGTTTACAGCCATTATTACATGCAGAGGGCTAATATTTTTTTTCCTTCtcttttttggc
cgccccatggcatatggagtacctgggctagggatcagatctgagctgtagttgcaacct
aTACCAGTTTGCACCAGCGATCAAACCTGACTGTGCCTGGCCGGGGGTGAAACCTGCATT
CTAGCAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               350-469, - strand, RNAz p=0.830659

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               350-469, - strand, RNAz p=0.830659

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               79-701, gnl|bosTau2|chr10 (59670984-59671604)
               

               
               79-701, gnl|Mm7|chr12 (81717349-81717874)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               79-701, gnl|bosTau2|chr10 (59670984-59671604)
               

               
               79-701, gnl|Mm7|chr12 (81717349-81717874)

	79-701, gnl\|bosTau2\|chr10 (59670984-59671604)
	79-701, gnl\|Mm7\|chr12 (81717349-81717874)