Non-Coding RNA Search

LyN1-MLN01D010037

Sequence:


               
               AAAAGAACTggagttcccatcgtggcagtgattagcgaatccaactaggaacgatgaggt
tttgggttcgatccctggtcttgctcagtgggttaaggctccggctttgccgtgagctga
ggtgtaggtcgcagacgtggctcggatcccatgtggctgtggctctggtgtaggccagca
gctgcggctccagttggactgctagcctgggaacctccatataccttgggtgtggcccta
GAAAACACAAAAACCAAAACAAAACAAATAAAAGAACTGCTGCACAGAGAGGTTAAGTAC
CTTAGGGGTCAGATGGTTTTGACAGCCTGGGCTGGGGCACAACACTAGTGCTCATGTTGG
TATAAAACCCACCAGAACATTAAGAACTGCCCATTCTGTGCAAGTGTTCCTCAGGAGGAG
CTGTTGTCTGGGTCGTCTTTCAAGGGAGGGCTCCTGAGCCTGTTTGGCTTCCTTGGTGAG
AATGCAGAGAGGCACAGCTGGCCTGCCCACAGCCACCACCTGTGCCAGGTGGTGATGATG
AGAAAGTGTGGAAACTGATGCCAGTAAACCCTGGGAGTCCTCAGCGCATGGGCTGTGGTC
TGCCTTGGACAGCCTGCAGCCTACTTAGAAAACCTTGAATGCATGAGAAGCTGGCTGCAG
ATTTGCCCCCATTGATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGAACTggagttcccatcgtggcagtgattagcgaatccaactaggaacgatgaggt
tttgggttcgatccctggtcttgctcagtgggttaaggctccggctttgccgtgagctga
ggtgtaggtcgcagacgtggctcggatcccatgtggctgtggctctggtgtaggccagca
gctgcggctccagttggactgctagcctgggaacctccatataccttgggtgtggcccta
GAAAACACAAAAACCAAAACAAAACAAATAAAAGAACTGCTGCACAGAGAGGTTAAGTAC
CTTAGGGGTCAGATGGTTTTGACAGCCTGGGCTGGGGCACAACACTAGTGCTCATGTTGG
TATAAAACCCACCAGAACATTAAGAACTGCCCATTCTGTGCAAGTGTTCCTCAGGAGGAG
CTGTTGTCTGGGTCGTCTTTCAAGGGAGGGCTCCTGAGCCTGTTTGGCTTCCTTGGTGAG
AATGCAGAGAGGCACAGCTGGCCTGCCCACAGCCACCACCTGTGCCAGGTGGTGATGATG
AGAAAGTGTGGAAACTGATGCCAGTAAACCCTGGGAGTCCTCAGCGCATGGGCTGTGGTC
TGCCTTGGACAGCCTGCAGCCTACTTAGAAAACCTTGAATGCATGAGAAGCTGGCTGCAG
ATTTGCCCCCATTGATG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               421-618, + strand, RNAz p=0.909258

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               421-618, + strand, RNAz p=0.909258

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               401-677, gnl|bosTau2|chr22 (23312546-23312805)
               

               
               401-677, gnl|Hg17|chr3 (69412209-69411916)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               401-677, gnl|bosTau2|chr22 (23312546-23312805)
               

               
               401-677, gnl|Hg17|chr3 (69412209-69411916)

	401-677, gnl\|bosTau2\|chr22 (23312546-23312805)
	401-677, gnl\|Hg17\|chr3 (69412209-69411916)