Non-Coding RNA Search

LyN1-MLN01D030069

Sequence:


               
               ATTCGAAAGTAGGCAAAAGACTCGAAGAGACAATTAACAATAAGAGATATTCAGTAAGCC
CATGAGGGTGCAAATTAATACCACAAGGAAGGTACTGCTGTATACCGACTGGTATGGCTA
AAGTGAAAAGACTGTGCATTTCTTGTCttaaacatatgtttactttatgaccaagcaatt
ctagtcctggatattcacccaagaaaatgaaaccttgtatatgcacaaacacacgtacct
gaatgtccttagcagctttgttcataattaccgaaaactggaaacatgcctgatgttctt
caactggtgatggtataaacagtggtatgtctataaaatggaatactactcagcaatcaa
aagaaacTGATACTTGCTCTATCAAAAAAAATGGATGAATCTCACATACAAAATGAAACA
ATCCATTTATTTGACATTTTGGAATAGGCAAAACCATATAGAGAGAAATCATACGAATGG
TTGTCAAGAGCAGTTAACTATAAAACGGTAGGAGGGAAATTTGGGAGGTACTGTTGTATA
TCTCGATTGTGGGGATGGTTACGTGGCTACATGAATCTTTCAAAAGTCATAGAACTAGTC
AGTGAAAGTCGTAAATTTTACTGTATGCAAATCATACCTGAGTTTAAAAAAGTTTTTTAA
GGACTGACAATAAGAAGTGTTAGCATGGATATGGAACAACTGGTCTGAAACTGTCATCAC
TGGTGAtgggagcataaaatggtacaaccaccttggaaaacagttgggaagttttatctg
aagcgaagcatacacctacaatataacccaataaacgcaatcctaggtatttaT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCGAAAGTAGGCAAAAGACTCGAAGAGACAATTAACAATAAGAGATATTCAGTAAGCC
CATGAGGGTGCAAATTAATACCACAAGGAAGGTACTGCTGTATACCGACTGGTATGGCTA
AAGTGAAAAGACTGTGCATTTCTTGTCttaaacatatgtttactttatgaccaagcaatt
ctagtcctggatattcacccaagaaaatgaaaccttgtatatgcacaaacacacgtacct
gaatgtccttagcagctttgttcataattaccgaaaactggaaacatgcctgatgttctt
caactggtgatggtataaacagtggtatgtctataaaatggaatactactcagcaatcaa
aagaaacTGATACTTGCTCTATCAAAAAAAATGGATGAATCTCACATACAAAATGAAACA
ATCCATTTATTTGACATTTTGGAATAGGCAAAACCATATAGAGAGAAATCATACGAATGG
TTGTCAAGAGCAGTTAACTATAAAACGGTAGGAGGGAAATTTGGGAGGTACTGTTGTATA
TCTCGATTGTGGGGATGGTTACGTGGCTACATGAATCTTTCAAAAGTCATAGAACTAGTC
AGTGAAAGTCGTAAATTTTACTGTATGCAAATCATACCTGAGTTTAAAAAAGTTTTTTAA
GGACTGACAATAAGAAGTGTTAGCATGGATATGGAACAACTGGTCTGAAACTGTCATCAC
TGGTGAtgggagcataaaatggtacaaccaccttggaaaacagttgggaagttttatctg
aagcgaagcatacacctacaatataacccaataaacgcaatcctaggtatttaT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               173-292, - strand, RNAz p=0.580303

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               173-292, - strand, RNAz p=0.580303

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               6-834, gnl|bosTau2|chr11 (76276090-76275231)
               

               
               6-834, gnl|Hg17|chr9 (123414465-123413638)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-834, gnl|bosTau2|chr11 (76276090-76275231)
               

               
               6-834, gnl|Hg17|chr9 (123414465-123413638)

	6-834, gnl\|bosTau2\|chr11 (76276090-76275231)
	6-834, gnl\|Hg17\|chr9 (123414465-123413638)