Non-Coding RNA Search

LyN1-MLN01D050007

Sequence:


               
               TCCAGCAGCTTCAGATTTCAACTCAGAGTAAAAGAGTATGTTAAGTGGCCTATGGGCAGC
AATGTGCTGATAAACTGGCTCTCTGGAGAAGGAAAAGCTTCTGATTTGTAGCATATGTCT
ATTTCTGTGGTATAATTATTCCCACTAGGGGAGTCAAAGTTCTGGAATGTATAACAGTCT
GCTCTTCAGCTGGTTCCAGCCAGCTCCAGCTTACCACTGCTGAACACGTGGTTCCTTGTC
TCACCCCTGACTGCTGCCACTTCCCCCTTCCCTACTTTGTTCTTGTGATACTGCCCTCCT
TGCTGTTCCTCAGACATGCCATATGTGCACTCACCTCAGAGGATCTTTACATTTTTAGTT
TGCTATAATTAGAATGCTCTTCTGAATACCTGCAGATTTGCTCATTTCTTATCTCTGTCA
AGTGTACTCGGATATCTTCTTTGATCTCCCTATATAAATTTGCAGTCTTTACACCTACCT
CACTGCTTCCTTTCTTCATTACCCTGCTTTATTTTTTTCTGAGCACTTGCAACATATGTT
TATCTATTACTTGCTTTCCCTTCCTGTATCCTTTGTTAGAGCAGGAACATTTTCTTCACT
ACAGATTCCTCAGCACCCACAAGAGTACCTACCACACAGGCACTCAAAAAGATGTTGAAT
CGGAGTTCaacaaatctggctaacatccatgaggacgcaggtttgatccctggcctcgat
cagtgggtttaggatccagtgttgccgtgagctgtggtg

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCAGCAGCTTCAGATTTCAACTCAGAGTAAAAGAGTATGTTAAGTGGCCTATGGGCAGC
AATGTGCTGATAAACTGGCTCTCTGGAGAAGGAAAAGCTTCTGATTTGTAGCATATGTCT
ATTTCTGTGGTATAATTATTCCCACTAGGGGAGTCAAAGTTCTGGAATGTATAACAGTCT
GCTCTTCAGCTGGTTCCAGCCAGCTCCAGCTTACCACTGCTGAACACGTGGTTCCTTGTC
TCACCCCTGACTGCTGCCACTTCCCCCTTCCCTACTTTGTTCTTGTGATACTGCCCTCCT
TGCTGTTCCTCAGACATGCCATATGTGCACTCACCTCAGAGGATCTTTACATTTTTAGTT
TGCTATAATTAGAATGCTCTTCTGAATACCTGCAGATTTGCTCATTTCTTATCTCTGTCA
AGTGTACTCGGATATCTTCTTTGATCTCCCTATATAAATTTGCAGTCTTTACACCTACCT
CACTGCTTCCTTTCTTCATTACCCTGCTTTATTTTTTTCTGAGCACTTGCAACATATGTT
TATCTATTACTTGCTTTCCCTTCCTGTATCCTTTGTTAGAGCAGGAACATTTTCTTCACT
ACAGATTCCTCAGCACCCACAAGAGTACCTACCACACAGGCACTCAAAAAGATGTTGAAT
CGGAGTTCaacaaatctggctaacatccatgaggacgcaggtttgatccctggcctcgat
cagtgggtttaggatccagtgttgccgtgagctgtggtg

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               154-272, - strand, RNAz p=0.89071

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               154-272, - strand, RNAz p=0.89071

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-383, gnl|bosTau2|chr28 (23670146-23670526)
               

               
               1-383, gnl|Hg17|chr10 (74150992-74151335)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-383, gnl|bosTau2|chr28 (23670146-23670526)
               

               
               1-383, gnl|Hg17|chr10 (74150992-74151335)

	1-383, gnl\|bosTau2\|chr28 (23670146-23670526)
	1-383, gnl\|Hg17\|chr10 (74150992-74151335)