Non-Coding RNA Search

LyN1-MLN01D080050

Sequence:


               
               ACTGCTTATTTATGTTAAAGTTAGTGCTAATTCTGCACTCCGCTTTTCAACCCTGGCTGT
TTTGTGTACTGAATGGTAGTTCTGAGTTTGAAAGAAGACTATTCTTTTTAGAAAACATAA
ACTTTTTAGAATCTTTTGTAAACATGTAGTGTAAATTTCCATTTTGAACTTTTGTAAGGA
TTCATGTATTTGGTACATATTTTCTCATTTACATGTGGACTTTCTGGTTTTTTTGCTGTG
ACATAGGATTGAACACTCATACCTCCTCTATTCCTAATAGGCCCTGAATTCTAAGACCAT
TCCTGAGCTGTTTTGTTCCAGCTTTGGGACGCCACCAAGTGATCAATTTGGATATTACAT
TTGGATGAAAAAGGTTTTTCTAATTTTTAATGAAAGGGCCAATATGTATTTCCTAACCAG
TTCCCCTTCCTTGGGAACAGAACACAGTGTTATTCTGGAATTTTATTCGGAAAATTTTAT
AAGTGAATTTCTTGGTGTGGCTTGGTTAGGATGTATCCAAGACAAACTGTTCTATGAGGC
ATGGTTGTTTTATCCTCATATATTTTATTTCCTCAGTCAAATTGCTGCCTTGGCACTGCC
ATATCACCCCTTCATAACCCATAAATCACCCACAGCCAGTCCCAAGTGACATAAACAGTT
TGCTAATGATAGGAAGTAGTGTTTTAAGTAGAAAAACTAAGAATAAACATATTTTCACTT
AAAATCCTGAGTGACATTTTGGCCTGAGGCATCAATAAAAGATTGTGGGTGTACAGAAGT
TAGAAAAAAATTGGAACTCATTCTTTACTAAACTGTATGCTGGCTTTCATGGCGGCTAGA
ATGAAATGTTGTCAATCTCACTTCCATAAACTTGCCAATTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGCTTATTTATGTTAAAGTTAGTGCTAATTCTGCACTCCGCTTTTCAACCCTGGCTGT
TTTGTGTACTGAATGGTAGTTCTGAGTTTGAAAGAAGACTATTCTTTTTAGAAAACATAA
ACTTTTTAGAATCTTTTGTAAACATGTAGTGTAAATTTCCATTTTGAACTTTTGTAAGGA
TTCATGTATTTGGTACATATTTTCTCATTTACATGTGGACTTTCTGGTTTTTTTGCTGTG
ACATAGGATTGAACACTCATACCTCCTCTATTCCTAATAGGCCCTGAATTCTAAGACCAT
TCCTGAGCTGTTTTGTTCCAGCTTTGGGACGCCACCAAGTGATCAATTTGGATATTACAT
TTGGATGAAAAAGGTTTTTCTAATTTTTAATGAAAGGGCCAATATGTATTTCCTAACCAG
TTCCCCTTCCTTGGGAACAGAACACAGTGTTATTCTGGAATTTTATTCGGAAAATTTTAT
AAGTGAATTTCTTGGTGTGGCTTGGTTAGGATGTATCCAAGACAAACTGTTCTATGAGGC
ATGGTTGTTTTATCCTCATATATTTTATTTCCTCAGTCAAATTGCTGCCTTGGCACTGCC
ATATCACCCCTTCATAACCCATAAATCACCCACAGCCAGTCCCAAGTGACATAAACAGTT
TGCTAATGATAGGAAGTAGTGTTTTAAGTAGAAAAACTAAGAATAAACATATTTTCACTT
AAAATCCTGAGTGACATTTTGGCCTGAGGCATCAATAAAAGATTGTGGGTGTACAGAAGT
TAGAAAAAAATTGGAACTCATTCTTTACTAAACTGTATGCTGGCTTTCATGGCGGCTAGA
ATGAAATGTTGTCAATCTCACTTCCATAAACTTGCCAATTGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               383-502, - strand, RNAz p=0.565095

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               383-502, - strand, RNAz p=0.565095

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-881, gnl|bosTau2|chr28 (20814495-20813610)
               

               
               1-881, gnl|Hg17|chr10 (73648583-73653631)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-881, gnl|bosTau2|chr28 (20814495-20813610)
               

               
               1-881, gnl|Hg17|chr10 (73648583-73653631)

	1-881, gnl\|bosTau2\|chr28 (20814495-20813610)
	1-881, gnl\|Hg17\|chr10 (73648583-73653631)