Non-Coding RNA Search

LyN1-MLN01D100095

Sequence:


               
               TAAATTTAGCACACATGGGTGAAATTACGCTTTCGGGTGCGCTTGGCACAGCTGAGACAA
TCTCCCAGAAGTTTCTAGGGCCAAGGAAACATTTGTAGCTAAAATATCATACATATTGGC
AACTGTACTCTTTTCTGATGTTGTTATAATTGGATAATTCTTTAGTTATATTATGTGTTT
AAAAGGCTACTTTAAAATATAAACATGATTTGAAAAGCTACCATAAGTTTTAGACAATAA
TTATAAACAGACTTCAGGAGCACAAACCTCCTGAAGATGAGCAGTGCTCATGTTCTTCTT
TCTGCTTCCTTTCTCTCAGTTGTGTGGTTACCAACTTCCTTCTAGCTAGGAGAAATGGCA
CTGTTTTCAATATCTCTTAGCATCCACTATCAGAATGAGATAATATCATTCACAGTATCG
ACTCTAAATTTAAGTGTCTTTAACATGTATTTCACAGTAGAAAGTAGTAATAGATGGATG
ATTCCTCAATACAAGTTTTCCAAAGATTTTTAAATACTCTCTTTGTTCTTTGAAAGAGGG
AGGGTCCTGCAAATCCGTAGTGTTTTGGGTGAATTTTTCTTTCGTTATTGTGTCTAATAA
AAGCTCAAAATCCAGTAGAATTTGAGTGTGACTTGTAAGTTTCATAATGAGAGTTCTATT
TCTACTTTGTTTAAAGTGTTATTGCCATTGTCTAGCTCGATGCCTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAATTTAGCACACATGGGTGAAATTACGCTTTCGGGTGCGCTTGGCACAGCTGAGACAA
TCTCCCAGAAGTTTCTAGGGCCAAGGAAACATTTGTAGCTAAAATATCATACATATTGGC
AACTGTACTCTTTTCTGATGTTGTTATAATTGGATAATTCTTTAGTTATATTATGTGTTT
AAAAGGCTACTTTAAAATATAAACATGATTTGAAAAGCTACCATAAGTTTTAGACAATAA
TTATAAACAGACTTCAGGAGCACAAACCTCCTGAAGATGAGCAGTGCTCATGTTCTTCTT
TCTGCTTCCTTTCTCTCAGTTGTGTGGTTACCAACTTCCTTCTAGCTAGGAGAAATGGCA
CTGTTTTCAATATCTCTTAGCATCCACTATCAGAATGAGATAATATCATTCACAGTATCG
ACTCTAAATTTAAGTGTCTTTAACATGTATTTCACAGTAGAAAGTAGTAATAGATGGATG
ATTCCTCAATACAAGTTTTCCAAAGATTTTTAAATACTCTCTTTGTTCTTTGAAAGAGGG
AGGGTCCTGCAAATCCGTAGTGTTTTGGGTGAATTTTTCTTTCGTTATTGTGTCTAATAA
AAGCTCAAAATCCAGTAGAATTTGAGTGTGACTTGTAAGTTTCATAATGAGAGTTCTATT
TCTACTTTGTTTAAAGTGTTATTGCCATTGTCTAGCTCGATGCCTGGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               344-462, + strand, RNAz p=0.910704

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               344-462, + strand, RNAz p=0.910704

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               53-696, gnl|bosTau2|chr6 (6027324-6027968)
               

               
               53-696, gnl|Hg17|chr4 (106449327-106449978)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               53-696, gnl|bosTau2|chr6 (6027324-6027968)
               

               
               53-696, gnl|Hg17|chr4 (106449327-106449978)

	53-696, gnl\|bosTau2\|chr6 (6027324-6027968)
	53-696, gnl\|Hg17\|chr4 (106449327-106449978)