Non-Coding RNA Search

LyN1-MLN01D120095

Sequence:


               
               TGTGGCATTGTCTTTATACCGCATCCGCAAGCCAGATCAGGTCAAATTGCATCTTCCCAT
TTCAGAGACTCTCTTTCAAATGAATAGAGACCAGCTTCAAAAGTTTGTACAGTATTTGAT
CACAGTGCACCACACAGAAGTTTTGCCAACTGCTCAAAAATTAGCAGATGAAATTCTTTC
CCAGAATTCAGAAATCAACCAAGTTCATGGTGAGTATAGACATTCATTCTTTAGATTGTG
TCTCTGGGTTGTTTTTCTTTTATAAATTTGATTTTTCTGCATAAAAATGAGATAAATATG
AATTAAGTCATCAGTGTTGCTCTTAGGTAGCTGAGAGTTTAAGTTTAGTTTCACATCCTA
AAACATTTCTTTTGACATGTTTTGTGCATTTACTAGATATCAAACCTTTTGTGCTCAAAT
GAAAATCTCATTTTTTTAATGCTTGGCTCTTATACTTTGATACTTTGTAAAATTTCATCA
AATACTCAATGTTAGTTAATTGTAAACACTTAGTCATTTAATTCACTTTTACCCTCTGTT
GTCAGTAAACTGGCTTGTGCATATTCAGAATTTTTTTTCATTTTTTTTAAAGATGTATGT
TCCAAGGGGGGAGGTTTCTGATATGATGTGTTATATTAAGAAAATATCggagttcccctt
gtggcacagcggaggcaaatccaactaggaaccatgagattgcgggttcgatccctggct
tcgctcagtgggttaaggatctggcattgccatgagctgcggagtangtcgcagacgggg
cttggatctggcgtggttgtggctgtggcTGGCAGCTACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGGCATTGTCTTTATACCGCATCCGCAAGCCAGATCAGGTCAAATTGCATCTTCCCAT
TTCAGAGACTCTCTTTCAAATGAATAGAGACCAGCTTCAAAAGTTTGTACAGTATTTGAT
CACAGTGCACCACACAGAAGTTTTGCCAACTGCTCAAAAATTAGCAGATGAAATTCTTTC
CCAGAATTCAGAAATCAACCAAGTTCATGGTGAGTATAGACATTCATTCTTTAGATTGTG
TCTCTGGGTTGTTTTTCTTTTATAAATTTGATTTTTCTGCATAAAAATGAGATAAATATG
AATTAAGTCATCAGTGTTGCTCTTAGGTAGCTGAGAGTTTAAGTTTAGTTTCACATCCTA
AAACATTTCTTTTGACATGTTTTGTGCATTTACTAGATATCAAACCTTTTGTGCTCAAAT
GAAAATCTCATTTTTTTAATGCTTGGCTCTTATACTTTGATACTTTGTAAAATTTCATCA
AATACTCAATGTTAGTTAATTGTAAACACTTAGTCATTTAATTCACTTTTACCCTCTGTT
GTCAGTAAACTGGCTTGTGCATATTCAGAATTTTTTTTCATTTTTTTTAAAGATGTATGT
TCCAAGGGGGGAGGTTTCTGATATGATGTGTTATATTAAGAAAATATCggagttcccctt
gtggcacagcggaggcaaatccaactaggaaccatgagattgcgggttcgatccctggct
tcgctcagtgggttaaggatctggcattgccatgagctgcggagtangtcgcagacgggg
cttggatctggcgtggttgtggctgtggcTGGCAGCTACAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61823145|ref|XP_594904.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61823145|ref|XP_594904.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               280-399, + strand, RNAz p=0.826631

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               280-399, + strand, RNAz p=0.826631

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-643, gnl|bosTau2|chr20 (10042809-10042179)
               

               
               1-643, gnl|Hg17|chr5 (60804413-60805032)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-643, gnl|bosTau2|chr20 (10042809-10042179)
               

               
               1-643, gnl|Hg17|chr5 (60804413-60805032)

	1-643, gnl\|bosTau2\|chr20 (10042809-10042179)
	1-643, gnl\|Hg17\|chr5 (60804413-60805032)