LyN1-MLN01E010009
|
AATTGCGGCCGGCTGGGTTCAGCTCTCTGGCTCTTCAGACTGGCGCTCCCACCAGAACAT
TCCTTACGGCATCCTCCTGGGGCTCTTCTCCATCGCTCCTTTTACTCTCTCCGGATCTGG
GGAACCAAGCTCCGGCCTCCACGCTTCTGCATTCGGTCTTCCCAGCAGCCCTCTGAGGTC
GTCAGGGTGGAATGAGTCTTACTTGACAGATGAGGAGACTCAGACGCGAGGTCCTGGAGT
CCGTCTCCAAAGCACGTCGGAAGGAGGGCGAGGTCTCGCTCCGTTCTCCTGACTCCACGT
GGATAGTCTTTCTGCTTCAGGCAGGTGGTGCTGTGCTGTGTGCTGCAGATTCCACTGAGT
GGGACCCTAAGGCCCAGCGGAACCCCCATGGCTCCTCCTTGCTCATTCCAGCAACGAAGC
CCACCTGTCCTGTAGAGCGCCCTCCGGTTTCCAGGCCTTGGATCAGGCCCATCTGCCCCC
TGAGACGCCCTCTCCCTTCCGCTCCAGCTTGCCTGACTCCCATCTCTGAAAGATGAACCC
TTGGCTACTTCCTCTGGGAGCTTCTTCCCGACTGTCTGGCCTTCCAGGATCCTCCCCTCC
CAGCGGTCCAGTGTCTGATTCCACGTAGCCTGACCGATCCGGGGGTGTTTGCCTGGTCTT
CCCAGCTGGATGGAGAGCTTTGGTGGGAGACATACATGGTTTCAACAAAGTAATGATACT
AACAACAGTAGCAGCTCCTACCCCATCCTGAGCANGACTGATGGGGGCCCCAAGCCAAAG
AACCCTCTCACTGTGGATCCTTCCCAGAATCCTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AATTGCGGCCGGCTGGGTTCAGCTCTCTGGCTCTTCAGACTGGCGCTCCCACCAGAACAT
TCCTTACGGCATCCTCCTGGGGCTCTTCTCCATCGCTCCTTTTACTCTCTCCGGATCTGG
GGAACCAAGCTCCGGCCTCCACGCTTCTGCATTCGGTCTTCCCAGCAGCCCTCTGAGGTC
GTCAGGGTGGAATGAGTCTTACTTGACAGATGAGGAGACTCAGACGCGAGGTCCTGGAGT
CCGTCTCCAAAGCACGTCGGAAGGAGGGCGAGGTCTCGCTCCGTTCTCCTGACTCCACGT
GGATAGTCTTTCTGCTTCAGGCAGGTGGTGCTGTGCTGTGTGCTGCAGATTCCACTGAGT
GGGACCCTAAGGCCCAGCGGAACCCCCATGGCTCCTCCTTGCTCATTCCAGCAACGAAGC
CCACCTGTCCTGTAGAGCGCCCTCCGGTTTCCAGGCCTTGGATCAGGCCCATCTGCCCCC
TGAGACGCCCTCTCCCTTCCGCTCCAGCTTGCCTGACTCCCATCTCTGAAAGATGAACCC
TTGGCTACTTCCTCTGGGAGCTTCTTCCCGACTGTCTGGCCTTCCAGGATCCTCCCCTCC
CAGCGGTCCAGTGTCTGATTCCACGTAGCCTGACCGATCCGGGGGTGTTTGCCTGGTCTT
CCCAGCTGGATGGAGAGCTTTGGTGGGAGACATACATGGTTTCAACAAAGTAATGATACT
AACAACAGTAGCAGCTCCTACCCCATCCTGAGCANGACTGATGGGGGCCCCAAGCCAAAG
AACCCTCTCACTGTGGATCCTTCCCAGAATCCTG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
2-115, gnl|bosTau2|chr7 (45431194-45431080) |
|
2-115, gnl|canFam2|chr2 (37815898-37816098) |
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2-115, gnl|dasNov1|scaffold_42709 (8924-9160) |
|
2-115, gnl|echTel1|scaffold_262654 (1703-1459) |
|
2-115, gnl|hg17|chr5 (139071434-139071669) |
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2-115, gnl|Hg17|chr5 (139071435-139071546) |
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2-115, gnl|mm7|chr18 (36266198-36266384) |
|
2-115, gnl|oryCun1|scaffold_187574 (3795-4038) |
|
2-115, gnl|panTro1|chr4 (145682624-145682859) |
|
2-115, gnl|rheMac2|chr6 (136120973-136121208) |
|
2-115, gnl|rn3|chr18 (28542197-28542399) |
| |
|
122-326, gnl|bosTau2|chr7 (45426113-45425908) |
|
122-326, gnl|Hg17|chr5 (139082874-139083686) |
| |
|
412-814, gnl|bosTau2|chr7 (45404537-45404127) |
|
412-814, gnl|Hg17|chr5 (139108890-139109290) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-115, gnl|bosTau2|chr7 (45431194-45431080) |
|
2-115, gnl|canFam2|chr2 (37815898-37816098) |
|
2-115, gnl|dasNov1|scaffold_42709 (8924-9160) |
|
2-115, gnl|echTel1|scaffold_262654 (1703-1459) |
|
2-115, gnl|hg17|chr5 (139071434-139071669) |
|
2-115, gnl|Hg17|chr5 (139071435-139071546) |
|
2-115, gnl|mm7|chr18 (36266198-36266384) |
|
2-115, gnl|oryCun1|scaffold_187574 (3795-4038) |
|
2-115, gnl|panTro1|chr4 (145682624-145682859) |
|
2-115, gnl|rheMac2|chr6 (136120973-136121208) |
|
2-115, gnl|rn3|chr18 (28542197-28542399) |
| |
|
122-326, gnl|bosTau2|chr7 (45426113-45425908) |
|
122-326, gnl|Hg17|chr5 (139082874-139083686) |
| |
|
412-814, gnl|bosTau2|chr7 (45404537-45404127) |
|
412-814, gnl|Hg17|chr5 (139108890-139109290) |
