Non-Coding RNA Search

LyN1-MLN01E030073

Sequence:


               
               ATCGTATTAAGTATTGGAGCATAGGAGAAGTAAAGAAAGTTTTGATCTAAACTCATTAAG
TATTATGTGGGGGCCTGAGATTGTTAAAAGTCATCCACCCTTCTCTTCCTAGAAAAGCTA
TCACGGTGCCAGAATATTTAATTCAGCCACACATTCTCATGAGTGTCTGTATCATCTAAT
TATCAGATAAATGACTCAGAGTAAAAGAGGCTAGATGAAGTGAGGAGGGGAGCACTATAA
TTACTGACTGAAGACATGCTGATGTCATTAATTTCCCTAGTGAAGAAGTTAGTGAGAAAT
AAATTACAATGAGATCCAAGTGTAACCTAATGACTTATTATTACCTTTGAAACCTCAGCT
AACAACATTGTCGGCATCATCATTACAAACTACTTATTAGCTGCACATACCCTTAAATTT
ATGCCCTTAATTAATTTCCTCCCTGGGGTATCATAGAACAATATTTGTTTTTATCCCCAG
TTCCTGGCACAGCTCCTAAGACCCTTGGAATTTCCCGAGTGATAAGAGTGATAGGAGAGT
ATTTTAATGAGGCCACTCTTGGCAAgcctctagatagcttcaggatgggggctagtgtcc
agagagaccaaaccttgactggaagcatgaaactttcagcctcaactcctgggaagggaa
agtggctggagattgagtttaatcaccaatggccaatggtttaatccatcatgcccatga
aatgaaaccttcatgaaaacccCTAAATGGAGGTGGGGAGGGTCTGGAGAGCTTCCAGGG
TGGCAAGCACATCAAGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCGTATTAAGTATTGGAGCATAGGAGAAGTAAAGAAAGTTTTGATCTAAACTCATTAAG
TATTATGTGGGGGCCTGAGATTGTTAAAAGTCATCCACCCTTCTCTTCCTAGAAAAGCTA
TCACGGTGCCAGAATATTTAATTCAGCCACACATTCTCATGAGTGTCTGTATCATCTAAT
TATCAGATAAATGACTCAGAGTAAAAGAGGCTAGATGAAGTGAGGAGGGGAGCACTATAA
TTACTGACTGAAGACATGCTGATGTCATTAATTTCCCTAGTGAAGAAGTTAGTGAGAAAT
AAATTACAATGAGATCCAAGTGTAACCTAATGACTTATTATTACCTTTGAAACCTCAGCT
AACAACATTGTCGGCATCATCATTACAAACTACTTATTAGCTGCACATACCCTTAAATTT
ATGCCCTTAATTAATTTCCTCCCTGGGGTATCATAGAACAATATTTGTTTTTATCCCCAG
TTCCTGGCACAGCTCCTAAGACCCTTGGAATTTCCCGAGTGATAAGAGTGATAGGAGAGT
ATTTTAATGAGGCCACTCTTGGCAAgcctctagatagcttcaggatgggggctagtgtcc
agagagaccaaaccttgactggaagcatgaaactttcagcctcaactcctgggaagggaa
agtggctggagattgagtttaatcaccaatggccaatggtttaatccatcatgcccatga
aatgaaaccttcatgaaaacccCTAAATGGAGGTGGGGAGGGTCTGGAGAGCTTCCAGGG
TGGCAAGCACATCAAGAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               596-707, + strand, RNAz p=0.916902

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               596-707, + strand, RNAz p=0.916902

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               450-751, gnl|bosTau2|chr2 (80871912-80871601)
               

               
               450-751, gnl|canFam2|chr10 (36247294-36247010)
               

               
               450-751, gnl|hg17|chr12 (104238791-104239085)
               

               
               450-751, gnl|Hg17|chr12 (104239079-104237991)
               

               
               450-751, gnl|panTro1|chr10 (106747524-106747818)
               

               
               450-751, gnl|rheMac2|chr11 (106458423-106458693)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               450-751, gnl|bosTau2|chr2 (80871912-80871601)
               

               
               450-751, gnl|canFam2|chr10 (36247294-36247010)
               

               
               450-751, gnl|hg17|chr12 (104238791-104239085)
               

               
               450-751, gnl|Hg17|chr12 (104239079-104237991)
               

               
               450-751, gnl|panTro1|chr10 (106747524-106747818)
               

               
               450-751, gnl|rheMac2|chr11 (106458423-106458693)

	450-751, gnl\|bosTau2\|chr2 (80871912-80871601)
	450-751, gnl\|canFam2\|chr10 (36247294-36247010)
	450-751, gnl\|hg17\|chr12 (104238791-104239085)
	450-751, gnl\|Hg17\|chr12 (104239079-104237991)
	450-751, gnl\|panTro1\|chr10 (106747524-106747818)
	450-751, gnl\|rheMac2\|chr11 (106458423-106458693)