Non-Coding RNA Search

LyN1-MLN01E040030

Sequence:


               
               AATTTATATTTTTAATAAGGTACTGACATCCTCTTTTGCTTATACAAGCCTGACTTTCTA
GTAACTTGGTCACAAAAAGTGCGTTAACTCAGTGACTTGTGAGATGAAAGATATTAATAC
ATGAATTGAGAAAATCATAATCTTGGAATATTGCCTTTTAGAAACTGTGTTTTTTGAGTT
TGTAATGTATGCAGAGCACTGCACTAGGTTCTGTCAGCAACAACAGAAATAAAACAGGAA
GTGGCGTTCCTGTTCCTTAGAGGCAAGGAAAAAACCTGGAGCCATGGAGAAGTTGAGAAA
CAAGGAGAAGGAAACAGTGAATAAAACTTTATATCCTGAGTTCTAACCTAATGCCTAAGT
TATATTTAAACACAAAGAATAAGTCACAGAAAGTGGCTAGGAAAGATTTCTTGTGGATAG
TAAATTGTACTATAAATCTTAGAGTGTTTAAGCAGGATCCAAATGGATGGAAGACTGGCT
GTCATGAGTAGTTTTTGCCAAGTAGGGAAAAACTGCAATCTTCCTAGTGGGTCTGCATCT
CTCCTAACAGAGCGACTTTTACTTTACTGGTTGCTCAGTAAATATTTGTTGAATGGAGTC
AGTTTTCCCCTTAGTGGAAGAGACACTGAAGGGTCTGATACTGTCAGCAAAATCAGCCTA
AGCCCTTCAGATCCTAGCATCCTTCAGGAATATGGATTTGTGATCAAGAGAGACCTATGT
TAAAAGTAAGGTATTTTGggagttcctgtcatggcgcagtggaaacaatctgactaggat
ccatgagcttgcangttcgatccctgncctcgct

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTTATATTTTTAATAAGGTACTGACATCCTCTTTTGCTTATACAAGCCTGACTTTCTA
GTAACTTGGTCACAAAAAGTGCGTTAACTCAGTGACTTGTGAGATGAAAGATATTAATAC
ATGAATTGAGAAAATCATAATCTTGGAATATTGCCTTTTAGAAACTGTGTTTTTTGAGTT
TGTAATGTATGCAGAGCACTGCACTAGGTTCTGTCAGCAACAACAGAAATAAAACAGGAA
GTGGCGTTCCTGTTCCTTAGAGGCAAGGAAAAAACCTGGAGCCATGGAGAAGTTGAGAAA
CAAGGAGAAGGAAACAGTGAATAAAACTTTATATCCTGAGTTCTAACCTAATGCCTAAGT
TATATTTAAACACAAAGAATAAGTCACAGAAAGTGGCTAGGAAAGATTTCTTGTGGATAG
TAAATTGTACTATAAATCTTAGAGTGTTTAAGCAGGATCCAAATGGATGGAAGACTGGCT
GTCATGAGTAGTTTTTGCCAAGTAGGGAAAAACTGCAATCTTCCTAGTGGGTCTGCATCT
CTCCTAACAGAGCGACTTTTACTTTACTGGTTGCTCAGTAAATATTTGTTGAATGGAGTC
AGTTTTCCCCTTAGTGGAAGAGACACTGAAGGGTCTGATACTGTCAGCAAAATCAGCCTA
AGCCCTTCAGATCCTAGCATCCTTCAGGAATATGGATTTGTGATCAAGAGAGACCTATGT
TAAAAGTAAGGTATTTTGggagttcctgtcatggcgcagtggaaacaatctgactaggat
ccatgagcttgcangttcgatccctgncctcgct

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               196-315, - strand, RNAz p=0.575344

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               196-315, - strand, RNAz p=0.575344

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-734, gnl|bosTau2|chr7 (66502586-66503315)
               

               
               3-734, gnl|Mm7|chr17 (61509234-61508623)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-734, gnl|bosTau2|chr7 (66502586-66503315)
               

               
               3-734, gnl|Mm7|chr17 (61509234-61508623)

	3-734, gnl\|bosTau2\|chr7 (66502586-66503315)
	3-734, gnl\|Mm7\|chr17 (61509234-61508623)