Non-Coding RNA Search

LyN1-MLN01E040096

Sequence:


               
               ACCAAAACTTAACATCAGCATGTCACTCAATCTATTTTTTGTACTTGATTTCAATTTTCA
AATTAGAGCATTTACTTACTTTTACCAGTAACTATATCATGTGTGTGTGTGTAGTGTGTG
TATATAGGTAGATACACAAAATACATACACACACGTATATATATGCACATGCATATCTAT
ACATACATATATATATGAAGTTGCTCTGGTACTTAGGATACATCCTGTTATGTATTTTGA
ATGTTTATTCTGCTAGTGTTATGACTGTTGTCATAAAGGCAGAACAGAAGAAATGGTTCT
TTAATCATTTTTATTTGGTAATTACAGGAAAACTTTAAGCTGACCTCATTTAATCTTTCA
AATTAATGAATTCAAATTTTTAATTATGTACATCATTCTCTTAGCAGAAAAACGGTGGTG
TATTTGAATAGTTTTAGTCATGCAACTCCCTACATGTCCCATCTGACAGAATGAAGTGAA
AATAGGTGTCCTCCTCAGACAGGTGTTTGAGAAGAGATTTGGCAGAAATCGACAAAAGCC
ACATGAGCCAGGATGGCACCATGGTGAGGTGACCCCACCACAACCACCACCAGGTGGCAG
AAGCAGAAGCTCACATGGGGACATCTTATTTCACTTTCTTTAGAAACCATGAGATTTTAG
CACAGAATTTAACAGGCAGCTGTAGAGAATGGCATGAAGTAGAGCTTCTCTGATGGGGAA
GTGAAGGGACTATAGAATCTCAGAGCTTGAGTTCAAGACTGACTTANGATTTTGTNAATG
AGTAAATGCCATTTTTTTTTCAGTGTTCCCTGGTATGGTTAATATGAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCAAAACTTAACATCAGCATGTCACTCAATCTATTTTTTGTACTTGATTTCAATTTTCA
AATTAGAGCATTTACTTACTTTTACCAGTAACTATATCATGTGTGTGTGTGTAGTGTGTG
TATATAGGTAGATACACAAAATACATACACACACGTATATATATGCACATGCATATCTAT
ACATACATATATATATGAAGTTGCTCTGGTACTTAGGATACATCCTGTTATGTATTTTGA
ATGTTTATTCTGCTAGTGTTATGACTGTTGTCATAAAGGCAGAACAGAAGAAATGGTTCT
TTAATCATTTTTATTTGGTAATTACAGGAAAACTTTAAGCTGACCTCATTTAATCTTTCA
AATTAATGAATTCAAATTTTTAATTATGTACATCATTCTCTTAGCAGAAAAACGGTGGTG
TATTTGAATAGTTTTAGTCATGCAACTCCCTACATGTCCCATCTGACAGAATGAAGTGAA
AATAGGTGTCCTCCTCAGACAGGTGTTTGAGAAGAGATTTGGCAGAAATCGACAAAAGCC
ACATGAGCCAGGATGGCACCATGGTGAGGTGACCCCACCACAACCACCACCAGGTGGCAG
AAGCAGAAGCTCACATGGGGACATCTTATTTCACTTTCTTTAGAAACCATGAGATTTTAG
CACAGAATTTAACAGGCAGCTGTAGAGAATGGCATGAAGTAGAGCTTCTCTGATGGGGAA
GTGAAGGGACTATAGAATCTCAGAGCTTGAGTTCAAGACTGACTTANGATTTTGTNAATG
AGTAAATGCCATTTTTTTTTCAGTGTTCCCTGGTATGGTTAATATGAGT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               158-298, + strand, RNAz p=0.930524

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               158-298, + strand, RNAz p=0.930524

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_018440, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_018440, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               158-789, gnl|bosTau2|chr14 (25197030-25196396)
               

               
               158-789, gnl|Hg17|chr8 (82047737-82047121)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               158-789, gnl|bosTau2|chr14 (25197030-25196396)
               

               
               158-789, gnl|Hg17|chr8 (82047737-82047121)

	158-789, gnl\|bosTau2\|chr14 (25197030-25196396)
	158-789, gnl\|Hg17\|chr8 (82047737-82047121)