Non-Coding RNA Search

LyN1-MLN01E070080

Sequence:


               
               GAGTTGGTGCCAGAGCCTTCTGTGGGTGCCAAGGCTGCGTTCTCAAAGACAGGTACTTGA
ATCCTCCTGCTTTGGGCTCAGGGGTGGTTCTGAGCCTACTCTGGGAATTTAGGAGCGTGT
CCTAGTGGGATCAAGTGACAGTGGTTCACAGGTCTCCAGGCCAGAAAGTACTCACCTTGC
TGGGTCACTTTTCTCTTCCCGATAGCTGGATATTCTCAGCCACAGATTCCTTTCTCTCTC
AACTTATTAGAGCTATTTTGAGAAAGTTGCTGGGGAGGGGAGGCCATTGTGAAATAAGAA
AGTCATAAGGGGATAGGTGCCTGCTTTCTACGTGGCAGGGGACAGGCACAAGGCTGCGCT
CCTCAGGGTGGCCACCCTCCACTGATCTGCCCCTTGTCCTGCACCCTTCACTTCGCTTCT
CTCCCGCCTGGCAATCCTGCTCCTTCTCAGCTAGCCAGCCCACTGGGGAGCAGTCAGATA
AACTTACGGCTGAGGAAATGTTTGTACGGCTTGAGAAATAGAAATAACAGACACAAAATC
ACAGTGGAGGACATTAAAGTATCTTTGTGCCGGAGACCATCAGAGCTGGAAGAGAGCCCT
GGCAGCCGACCCTGTCACCCTTGCCCTGTGCACAGCAGAGGGAACCGCCTGCCCCCTCCT
GAGGAAAAGTGAATTTTACGGGCAGGTGGCCATGATTTGTACCACATGACCTGATGCTCT
GGCTGCCGCTGATTGGACAGGGAAGAGCAACTGTGCCAAGGGCAGCTTTACAGCCTGCCT
TACCCCAATAAGCTGGCCTGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTTGGTGCCAGAGCCTTCTGTGGGTGCCAAGGCTGCGTTCTCAAAGACAGGTACTTGA
ATCCTCCTGCTTTGGGCTCAGGGGTGGTTCTGAGCCTACTCTGGGAATTTAGGAGCGTGT
CCTAGTGGGATCAAGTGACAGTGGTTCACAGGTCTCCAGGCCAGAAAGTACTCACCTTGC
TGGGTCACTTTTCTCTTCCCGATAGCTGGATATTCTCAGCCACAGATTCCTTTCTCTCTC
AACTTATTAGAGCTATTTTGAGAAAGTTGCTGGGGAGGGGAGGCCATTGTGAAATAAGAA
AGTCATAAGGGGATAGGTGCCTGCTTTCTACGTGGCAGGGGACAGGCACAAGGCTGCGCT
CCTCAGGGTGGCCACCCTCCACTGATCTGCCCCTTGTCCTGCACCCTTCACTTCGCTTCT
CTCCCGCCTGGCAATCCTGCTCCTTCTCAGCTAGCCAGCCCACTGGGGAGCAGTCAGATA
AACTTACGGCTGAGGAAATGTTTGTACGGCTTGAGAAATAGAAATAACAGACACAAAATC
ACAGTGGAGGACATTAAAGTATCTTTGTGCCGGAGACCATCAGAGCTGGAAGAGAGCCCT
GGCAGCCGACCCTGTCACCCTTGCCCTGTGCACAGCAGAGGGAACCGCCTGCCCCCTCCT
GAGGAAAAGTGAATTTTACGGGCAGGTGGCCATGATTTGTACCACATGACCTGATGCTCT
GGCTGCCGCTGATTGGACAGGGAAGAGCAACTGTGCCAAGGGCAGCTTTACAGCCTGCCT
TACCCCAATAAGCTGGCCTGGTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               652-801, - strand, RNAz p=0.995646

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               652-801, - strand, RNAz p=0.995646

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-801, gnl|bosTau2|chr9 (22618203-22618981)
               

               
               5-801, gnl|Hg17|chr6 (110843410-110842628)
               

               
               5-801, gnl|Mm7|chr10 (40417660-40418340)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-801, gnl|bosTau2|chr9 (22618203-22618981)
               

               
               5-801, gnl|Hg17|chr6 (110843410-110842628)
               

               
               5-801, gnl|Mm7|chr10 (40417660-40418340)

	5-801, gnl\|bosTau2\|chr9 (22618203-22618981)
	5-801, gnl\|Hg17\|chr6 (110843410-110842628)
	5-801, gnl\|Mm7\|chr10 (40417660-40418340)