Non-Coding RNA Search

LyN1-MLN01E070092

Sequence:


               
               CTACGTTTGCTTTGGAAGCAGTGGGGAGCATGGGGAGCGCCTGTGGCTTGGCATAGGCGA
CAGGCATGAGCAGGGCCAGTGTCGCTGGGGAGGCGGACTGACAGAGGTGAGGAGAGACTG
GTATCAGGGAAAGGGGCTGGGGTCAGCAGCCCTGGCAGGCCAGGATGGCGGTGGTGACAG
GAAAGCAAATGGGGGATGTGGGAGAGGGGGCTCAGGAAGAATGAGCCAAGGACATGAACA
GCATTAGCTCAGCGCTGGGCACCGTGAGCTCTGCTGCACCTGCTTGGGGAGCAGAAGCGC
CTTCACCTCAGCGATCATGGGGTCTGCTGGTCAGCGGTGCTTTCTTCCTCTTGTTCTGAC
CCCGAGATGTTGTCTAGTGTGGACTCTTTCCACTTTAGCAGAGCTGACCCTCGGGAGGGT
TGTGGCTGTGAGCTTATCTTGAGGATGGGTTTGTGGGTCCTGGAATCTGTGAAGCTCAGA
ATTCTGTGTAAGCCAGACCCAGCCTTCTACAACGAACAGCTCTGACTTTTGTAAAGAGAA
AAGGAGGAAAAGTAATTTTTAAAACAAAAAGCggagttcctgtcatagcgcagcagaaac
gaatctgactaggaaccatgaggttgcaggttcgatccctggcctcactcagtgggttaa
ggatctggcgttgcagtgagctggggtgtangtcacagatgcggctcagatcccacgttg
ctgtggctgtggtgcaggctggca

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTACGTTTGCTTTGGAAGCAGTGGGGAGCATGGGGAGCGCCTGTGGCTTGGCATAGGCGA
CAGGCATGAGCAGGGCCAGTGTCGCTGGGGAGGCGGACTGACAGAGGTGAGGAGAGACTG
GTATCAGGGAAAGGGGCTGGGGTCAGCAGCCCTGGCAGGCCAGGATGGCGGTGGTGACAG
GAAAGCAAATGGGGGATGTGGGAGAGGGGGCTCAGGAAGAATGAGCCAAGGACATGAACA
GCATTAGCTCAGCGCTGGGCACCGTGAGCTCTGCTGCACCTGCTTGGGGAGCAGAAGCGC
CTTCACCTCAGCGATCATGGGGTCTGCTGGTCAGCGGTGCTTTCTTCCTCTTGTTCTGAC
CCCGAGATGTTGTCTAGTGTGGACTCTTTCCACTTTAGCAGAGCTGACCCTCGGGAGGGT
TGTGGCTGTGAGCTTATCTTGAGGATGGGTTTGTGGGTCCTGGAATCTGTGAAGCTCAGA
ATTCTGTGTAAGCCAGACCCAGCCTTCTACAACGAACAGCTCTGACTTTTGTAAAGAGAA
AAGGAGGAAAAGTAATTTTTAAAACAAAAAGCggagttcctgtcatagcgcagcagaaac
gaatctgactaggaaccatgaggttgcaggttcgatccctggcctcactcagtgggttaa
ggatctggcgttgcagtgagctggggtgtangtcacagatgcggctcagatcccacgttg
ctgtggctgtggtgcaggctggca

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               33-150, + strand, RNAz p=0.695337

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               33-150, + strand, RNAz p=0.695337

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               33-568, gnl|bosTau2|chr12 (29107746-29108280)
               

               
               33-568, gnl|Mm7|chr17 (85559164-85558709)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-568, gnl|bosTau2|chr12 (29107746-29108280)
               

               
               33-568, gnl|Mm7|chr17 (85559164-85558709)

	33-568, gnl\|bosTau2\|chr12 (29107746-29108280)
	33-568, gnl\|Mm7\|chr17 (85559164-85558709)