Non-Coding RNA Search

LyN1-MLN01E080041

Sequence:


               
               Tatgttgtaacacatatcaaaatttccttcctttttaaggctggataatattctgttgta
tgtatacaccacattctgtttatccattttctgttaattgacacttgggttatttccacc
ttttgactattgtgcccaattctgcagtgaacgtgggtgtCCATCGCTCTAAACATTTTG
CTGTTTTTTTCCCATCTCTCTAGAAGCAATCTCTTTTTTTGAGGTGATTTACAAAAGGAA
GGGGAGGGTTGGTTTGAATGCAGTGATTCCTCATCAGACTTGGTGCCTGAAAGTTCACAT
TTCAGGGGAAATGAGTGATTTCCTGTCTGCTGGAAAGAAGCAATTCTAGGAATTTTTTAA
TGTGTGTGCAAACAACTGGCCAAGAAATCTCTTGATCATTGGGGTCATCTTATCAACCTT
TGTCTATTTCTAGCCCTTCCACCTATTTTCTTCAACAATGGAGCCAGTTAATTCTTTACT
GCCACCCAGAATACAATCACAACACACATACACACATATACATAGCTATGTCTCTGTGTA
TCATATGAATGCTTCACTTTTTAAAAATGCAGTATTTTTTCCTTGTAACAAAAAGAAATA
CTTGTGTGAAACCTTTAGAAAAAAAAAAAAAAAAAACAggagttcctgtcgtggcacagt
ggttagcgaatccgactaggaaccatgaggttgcgggtttggtccctgcccttgctcagt
gggttgacgatccggcattgccgtgagctgtg

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               Tatgttgtaacacatatcaaaatttccttcctttttaaggctggataatattctgttgta
tgtatacaccacattctgtttatccattttctgttaattgacacttgggttatttccacc
ttttgactattgtgcccaattctgcagtgaacgtgggtgtCCATCGCTCTAAACATTTTG
CTGTTTTTTTCCCATCTCTCTAGAAGCAATCTCTTTTTTTGAGGTGATTTACAAAAGGAA
GGGGAGGGTTGGTTTGAATGCAGTGATTCCTCATCAGACTTGGTGCCTGAAAGTTCACAT
TTCAGGGGAAATGAGTGATTTCCTGTCTGCTGGAAAGAAGCAATTCTAGGAATTTTTTAA
TGTGTGTGCAAACAACTGGCCAAGAAATCTCTTGATCATTGGGGTCATCTTATCAACCTT
TGTCTATTTCTAGCCCTTCCACCTATTTTCTTCAACAATGGAGCCAGTTAATTCTTTACT
GCCACCCAGAATACAATCACAACACACATACACACATATACATAGCTATGTCTCTGTGTA
TCATATGAATGCTTCACTTTTTAAAAATGCAGTATTTTTTCCTTGTAACAAAAAGAAATA
CTTGTGTGAAACCTTTAGAAAAAAAAAAAAAAAAAACAggagttcctgtcgtggcacagt
ggttagcgaatccgactaggaaccatgaggttgcgggtttggtccctgcccttgctcagt
gggttgacgatccggcattgccgtgagctgtg

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               240-358, + strand, RNAz p=0.979

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               240-358, + strand, RNAz p=0.979

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-522, gnl|bosTau2|chr24 (23692497-23691978)
               

               
               2-522, gnl|Hg17|chr18 (18999627-19000119)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-522, gnl|bosTau2|chr24 (23692497-23691978)
               

               
               2-522, gnl|Hg17|chr18 (18999627-19000119)

	2-522, gnl\|bosTau2\|chr24 (23692497-23691978)
	2-522, gnl\|Hg17\|chr18 (18999627-19000119)