LyN1-MLN01F040067
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TTGCTGAATTGCAGTATAGTCACTGCAAACACAGAGCCCTAAGAAATCAGATTTAGCAAA
TCAGCTTCCCAGAGTGTATTTGCCAAGTGGGTATTGAAGCCTGCTCCACTCGGCTCTGAT
GGGAACCAAGCAGAGGGGTGTGATGACACATAGATGTATCTCTGGGCTCCAGGAACCAAT
TTCAGTCACTTCTGCCAAGCATCTGTTTTGCTACCTGGCAAAACTTTAGGACTTATGTAC
CCATTTCCCCTCATGTTTTATATCTGCTGCTACTGTGCCATCTTGTATTTCCTACAGGAG
TTATATATACCTTTGGGTTTATCTTTTTTTCTCTTTCAGTGAACAAGTAAATGTTGAGCA
CTTTGGGGCATAGACAGAGGCAGAGTTGGTTGTCTCTGTAGGCATTTACTACCTGCAGTA
AATGCAGCATTCAGCAGTTAAGTCACTGTGAGCAGGCCTTGGGGAAGGATACGATGGGTT
CTCCCAGTCTTCCAGGCAGTGATACTCTGGGTTCAGAAGAGCCTATCATACTTGTGGGCT
TAACTGATGAGTCTTCCCAGAGGAGATGCAAATAAGCTTGACCTTGTATTTGGAAAAAAG
AGCAGGGAGCCCTTTGCAGTAGGAAAGCAGGAGGAGGGAAGACTTCGAGGTCCCTTCAGT
TCCATGTATCTGTAAAGTGAGGGTAGTGGCACCTATATAATGAGGTAGTGAGTGTGTGTA
TGTGCATGTGTGTATGTGTCTCAGACATGTAAGCTCTGTGTCCTTATCCTTTGCTACAAT
ATATT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TTGCTGAATTGCAGTATAGTCACTGCAAACACAGAGCCCTAAGAAATCAGATTTAGCAAA
TCAGCTTCCCAGAGTGTATTTGCCAAGTGGGTATTGAAGCCTGCTCCACTCGGCTCTGAT
GGGAACCAAGCAGAGGGGTGTGATGACACATAGATGTATCTCTGGGCTCCAGGAACCAAT
TTCAGTCACTTCTGCCAAGCATCTGTTTTGCTACCTGGCAAAACTTTAGGACTTATGTAC
CCATTTCCCCTCATGTTTTATATCTGCTGCTACTGTGCCATCTTGTATTTCCTACAGGAG
TTATATATACCTTTGGGTTTATCTTTTTTTCTCTTTCAGTGAACAAGTAAATGTTGAGCA
CTTTGGGGCATAGACAGAGGCAGAGTTGGTTGTCTCTGTAGGCATTTACTACCTGCAGTA
AATGCAGCATTCAGCAGTTAAGTCACTGTGAGCAGGCCTTGGGGAAGGATACGATGGGTT
CTCCCAGTCTTCCAGGCAGTGATACTCTGGGTTCAGAAGAGCCTATCATACTTGTGGGCT
TAACTGATGAGTCTTCCCAGAGGAGATGCAAATAAGCTTGACCTTGTATTTGGAAAAAAG
AGCAGGGAGCCCTTTGCAGTAGGAAAGCAGGAGGAGGGAAGACTTCGAGGTCCCTTCAGT
TCCATGTATCTGTAAAGTGAGGGTAGTGGCACCTATATAATGAGGTAGTGAGTGTGTGTA
TGTGCATGTGTGTATGTGTCTCAGACATGTAAGCTCTGTGTCCTTATCCTTTGCTACAAT
ATATT
|
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1-198, - strand, RNAz p=0.968411 |
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345-447, - strand, RNAz p=0.540338 |
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356-475, - strand, RNAz p=0.801022 |
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481-679, - strand, RNAz p=0.986672 |
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513-625, + strand, RNAz p=0.648405 |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-198, - strand, RNAz p=0.968411 |
|
345-447, - strand, RNAz p=0.540338 |
|
356-475, - strand, RNAz p=0.801022 |
|
481-679, - strand, RNAz p=0.986672 |
|
513-625, + strand, RNAz p=0.648405 |
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1-775, gnl|bosTau2|chr10 (56009036-56008273) |
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1-775, gnl|canFam2|chr8 (46438747-46439294) |
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1-775, gnl|dasNov1|scaffold_2547 (2139-2681) |
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1-775, gnl|echTel1|scaffold_309022 (156875-157417) |
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1-775, gnl|hg17|chr14 (69185668-69186199) |
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1-775, gnl|Hg17|chr14 (69185729-69186463) |
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1-775, gnl|loxAfr1|scaffold_17652 (17575-18100) |
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1-775, gnl|mm7|chr12 (78782784-78783314) |
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1-775, gnl|oryCun1|scaffold_199344 (82063-82574) |
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1-775, gnl|panTro1|chr15 (68864613-68865144) |
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1-775, gnl|rheMac2|chr7 (132784867-132785399) |
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1-775, gnl|rn3|chr6 (104587157-104587664) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-775, gnl|bosTau2|chr10 (56009036-56008273) |
|
1-775, gnl|canFam2|chr8 (46438747-46439294) |
|
1-775, gnl|dasNov1|scaffold_2547 (2139-2681) |
|
1-775, gnl|echTel1|scaffold_309022 (156875-157417) |
|
1-775, gnl|hg17|chr14 (69185668-69186199) |
|
1-775, gnl|Hg17|chr14 (69185729-69186463) |
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1-775, gnl|loxAfr1|scaffold_17652 (17575-18100) |
|
1-775, gnl|mm7|chr12 (78782784-78783314) |
|
1-775, gnl|oryCun1|scaffold_199344 (82063-82574) |
|
1-775, gnl|panTro1|chr15 (68864613-68865144) |
|
1-775, gnl|rheMac2|chr7 (132784867-132785399) |
|
1-775, gnl|rn3|chr6 (104587157-104587664) |
