Non-Coding RNA Search

LyN1-MLN01F040096

Sequence:


               
               TTTTCATTTTTGAAGACTTAAATAGAGGAGACATGACAGGGGTCCCGTTTCATCTCTTGG
ACCATTAATTATGCCATGGTGGTTTCAGTACTGATGAGACACCAAGACAAATGAATCTTG
TTGGATTTTATTCTGTTTAACAGATTTCATTCTTCAAACAAGTTTTCTTAGAAAATCATT
AATCACTAAACTATGGATTAAATAGTGACAATAATGGAAATATAACCAACAACAAATTGT
TCATGGTTGGCTTCTCCAAGGATTTGACAGCTAATTTATAAAACAAGTTATTTTTATATA
GTAAGACTTCTGTGACTAAAGTACAATTGCTTCAACAAAAATGCTCAGCATTATTCCCTA
GTCTGTGGGGGAATGAATACACAGACCTTTATTCTTCTCTCTTGATCCCCTTTTCTTGCC
TCTTTTTGCAAGATTTCAGTTGGTCCTGACTCATTGCCAGCATATGCCCCTGAAACATTT
ACTATGTTTGCTGGTATAAAAGGTTATGAAATCTATTTTTTGTCCTCAACCCAGAGTCCA
CACTGGAAAGCTCTCAAGCCATATTATGGGAAACTTGGCATACAGATAAAACAAAATTCC
TAAGACTCTGTTGCAGGAGAGTGATGGTATCTTCTCAGTCAGAACTGGCATATTTTGGGG
AGCAGTTGGAAATGGGGAGAAGGAGTTTTTTTGAACAGGTGGTGAAACAGAGCAGGACCC
TATGGTCCTCCCCACACCCCCATGTTTTTCACCTGCCTTTTGTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCATTTTTGAAGACTTAAATAGAGGAGACATGACAGGGGTCCCGTTTCATCTCTTGG
ACCATTAATTATGCCATGGTGGTTTCAGTACTGATGAGACACCAAGACAAATGAATCTTG
TTGGATTTTATTCTGTTTAACAGATTTCATTCTTCAAACAAGTTTTCTTAGAAAATCATT
AATCACTAAACTATGGATTAAATAGTGACAATAATGGAAATATAACCAACAACAAATTGT
TCATGGTTGGCTTCTCCAAGGATTTGACAGCTAATTTATAAAACAAGTTATTTTTATATA
GTAAGACTTCTGTGACTAAAGTACAATTGCTTCAACAAAAATGCTCAGCATTATTCCCTA
GTCTGTGGGGGAATGAATACACAGACCTTTATTCTTCTCTCTTGATCCCCTTTTCTTGCC
TCTTTTTGCAAGATTTCAGTTGGTCCTGACTCATTGCCAGCATATGCCCCTGAAACATTT
ACTATGTTTGCTGGTATAAAAGGTTATGAAATCTATTTTTTGTCCTCAACCCAGAGTCCA
CACTGGAAAGCTCTCAAGCCATATTATGGGAAACTTGGCATACAGATAAAACAAAATTCC
TAAGACTCTGTTGCAGGAGAGTGATGGTATCTTCTCAGTCAGAACTGGCATATTTTGGGG
AGCAGTTGGAAATGGGGAGAAGGAGTTTTTTTGAACAGGTGGTGAAACAGAGCAGGACCC
TATGGTCCTCCCCACACCCCCATGTTTTTCACCTGCCTTTTGTCTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-266, + strand, RNAz p=0.859231

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-266, + strand, RNAz p=0.859231

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-412, gnl|bosTau2|chr4 (9461940-9461518)
               

               
               1-412, gnl|Hg17|chr7 (18046165-18046641)
               

               
               1-412, gnl|Mm7|chr12 (32623194-32622745)
               


               
               444-706, gnl|bosTau2|chr4 (9461530-9461269)
               

               
               444-706, gnl|Hg17|chr7 (18046578-18047771)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-412, gnl|bosTau2|chr4 (9461940-9461518)
               

               
               1-412, gnl|Hg17|chr7 (18046165-18046641)
               

               
               1-412, gnl|Mm7|chr12 (32623194-32622745)
               


               
               444-706, gnl|bosTau2|chr4 (9461530-9461269)
               

               
               444-706, gnl|Hg17|chr7 (18046578-18047771)

	1-412, gnl\|bosTau2\|chr4 (9461940-9461518)
	1-412, gnl\|Hg17\|chr7 (18046165-18046641)
	1-412, gnl\|Mm7\|chr12 (32623194-32622745)

	444-706, gnl\|bosTau2\|chr4 (9461530-9461269)
	444-706, gnl\|Hg17\|chr7 (18046578-18047771)