LyN1-MLN01F060103
|
AACAGTACCGATCACCTGCTCATGGGCCGCAGAGTGGGAGCTATGTTCTCTCTTGGAAGG
CCCTGCAGCACCTCTCTTGGGAGTGGAAAAGGAAGTGGCCAAAGCTCTCTCTGCCCCTGG
TGAAACTGGGTCTGGCTCTACCTGAGCCCCAGCAGTTGTTCAGAGAGGTCCTGCCGGTCC
CGCTCCACAGCCTGCAGCCGCACTTCAAGAGCCGCCTTTTCCCGCACCAGAGCCTCCTTC
TCCTGGACTTCCCGGGCGAGCACCTCTTCCTGCCGCTTTGCCTCCTGACGCAGCTGCTCC
ATCTGAACTGAGACTGCCTCCTGCTGGTGATGTGCCTGAGGGGAAGTAATTGATGAGATA
CAGAGCAGAGGCAGGACCCCCCCCAACTCCCGCTCCCAGGGCTGCCATCCCCAGAGTAGG
GCCACTGGCTCTTCAGAAATTCTAATCCCAGCATTTCAAATCTCAGAGCCCTGAGCATTG
TCTATGCATATGAAGTGCCATTTATCCATTTCTCTGACCAACCCATAGAGCCCCCTGCCC
CAGAAACAGCAAGAGATCCACCTCTAAGGAGCTTTTAGTCTTAAGGAGAAGCAAGACACA
TACACAATACCACGAAGAAAGTGATTGGGGCCCTGAGAAAGGGACTCTGAGACGGGAGAT
TAGTTATGTGTAACTCTTAGAGCATGAGAAGTTTGGGTCACTGGTTCAGAAAAAACTTGG
TGAATCCCCTGTTATGTGTTAGACATTGTGCTAAAAACTAGAGGAATAAAAACTAGTAAG
AAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AACAGTACCGATCACCTGCTCATGGGCCGCAGAGTGGGAGCTATGTTCTCTCTTGGAAGG
CCCTGCAGCACCTCTCTTGGGAGTGGAAAAGGAAGTGGCCAAAGCTCTCTCTGCCCCTGG
TGAAACTGGGTCTGGCTCTACCTGAGCCCCAGCAGTTGTTCAGAGAGGTCCTGCCGGTCC
CGCTCCACAGCCTGCAGCCGCACTTCAAGAGCCGCCTTTTCCCGCACCAGAGCCTCCTTC
TCCTGGACTTCCCGGGCGAGCACCTCTTCCTGCCGCTTTGCCTCCTGACGCAGCTGCTCC
ATCTGAACTGAGACTGCCTCCTGCTGGTGATGTGCCTGAGGGGAAGTAATTGATGAGATA
CAGAGCAGAGGCAGGACCCCCCCCAACTCCCGCTCCCAGGGCTGCCATCCCCAGAGTAGG
GCCACTGGCTCTTCAGAAATTCTAATCCCAGCATTTCAAATCTCAGAGCCCTGAGCATTG
TCTATGCATATGAAGTGCCATTTATCCATTTCTCTGACCAACCCATAGAGCCCCCTGCCC
CAGAAACAGCAAGAGATCCACCTCTAAGGAGCTTTTAGTCTTAAGGAGAAGCAAGACACA
TACACAATACCACGAAGAAAGTGATTGGGGCCCTGAGAAAGGGACTCTGAGACGGGAGAT
TAGTTATGTGTAACTCTTAGAGCATGAGAAGTTTGGGTCACTGGTTCAGAAAAAACTTGG
TGAATCCCCTGTTATGTGTTAGACATTGTGCTAAAAACTAGAGGAATAAAAACTAGTAAG
AAAAAAAAAAAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
107-428, gnl|bosTau2|chr13 (45707776-45707466) |
|
107-428, gnl|Hg17|chr20 (33530701-33530374) |
|
107-428, gnl|Mm7|chr2 (155716758-155716423) |
| |
|
549-657, gnl|bosTau2|chr13 (45707367-45707264) |
|
549-657, gnl|canFam2|chr24 (27407905-27408004) |
|
549-657, gnl|hg17|chr20 (33530151-33530250) |
|
549-657, gnl|Hg17|chr20 (33530245-33530159) |
|
549-657, gnl|loxAfr1|scaffold_5221 (30935-31034) |
|
549-657, gnl|mm7|chr2 (155716229-155716286) |
|
549-657, gnl|panTro1|chr21 (35550098-35550197) |
|
549-657, gnl|rheMac2|chr10 (29066007-29065908) |
|
549-657, gnl|rn3|chr3 (146289359-146289420) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
107-428, gnl|bosTau2|chr13 (45707776-45707466) |
|
107-428, gnl|Hg17|chr20 (33530701-33530374) |
|
107-428, gnl|Mm7|chr2 (155716758-155716423) |
| |
|
549-657, gnl|bosTau2|chr13 (45707367-45707264) |
|
549-657, gnl|canFam2|chr24 (27407905-27408004) |
|
549-657, gnl|hg17|chr20 (33530151-33530250) |
|
549-657, gnl|Hg17|chr20 (33530245-33530159) |
|
549-657, gnl|loxAfr1|scaffold_5221 (30935-31034) |
|
549-657, gnl|mm7|chr2 (155716229-155716286) |
|
549-657, gnl|panTro1|chr21 (35550098-35550197) |
|
549-657, gnl|rheMac2|chr10 (29066007-29065908) |
|
549-657, gnl|rn3|chr3 (146289359-146289420) |
