Non-Coding RNA Search

LyN1-MLN01F120076

Sequence:


               
               TGTACTACATTGGCAGTCGGCCAATGTCTCTGTGCCTCAGTACCTTCACCTGTGACCTGG
GATGATAATACCTACTTCAGAGGCTTGGGATGAGGAGGGTATGGAGTGACTGATGTGCAG
GAATCCAGTGCAAAGTGGTGGCTTGTCCGGTGGCACAACTTGGCACCTGTAGGCTTTGGT
GCCTCCTAGGCATGCATGCTCTGTGGGCAGCCTGCACATTCCTCTCCCACAGAGTGTACT
GCTGAAATCTTGAGGTTTGTGGACAAGACTTCTCTGGGCCTTCCTAGGTGGTTTCCACTT
CCTCATTCCTAGCCTCCTCCCACCCTCACTTAGCTGCATCACTGAAGTAGAGAGGCTGGA
GAAGAGCGTGCTACTGGGAGGCCCCAGCCTCTGGGCACAGAGGGGACGGGATGGGCAGGC
TGGAGGGGACGAGTTCAGAGGACTAAAGGTGGGCCAGTTAAACTGCAAGTGCAGGCATCC
CTCATTTCCTCTGTCCCTCTAGCGAGTATCCGTATCCCGGATAATGTTCAGTTGTTAGAG
CACTGCTTCCCTGAGGAACATTTTCAGAATGGAAAAGGACATAggagttcctgtcgtggc
tcactgtttaacgaatccaactaagaaccatgaggttgcaggttcgatccctggccttgc
tcagtgggttaaggatccagcattaccgtgagctgtggtgtaggtcacagacgtggctcg
gatcccatgttgctgtggctctggcgtaNG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTACTACATTGGCAGTCGGCCAATGTCTCTGTGCCTCAGTACCTTCACCTGTGACCTGG
GATGATAATACCTACTTCAGAGGCTTGGGATGAGGAGGGTATGGAGTGACTGATGTGCAG
GAATCCAGTGCAAAGTGGTGGCTTGTCCGGTGGCACAACTTGGCACCTGTAGGCTTTGGT
GCCTCCTAGGCATGCATGCTCTGTGGGCAGCCTGCACATTCCTCTCCCACAGAGTGTACT
GCTGAAATCTTGAGGTTTGTGGACAAGACTTCTCTGGGCCTTCCTAGGTGGTTTCCACTT
CCTCATTCCTAGCCTCCTCCCACCCTCACTTAGCTGCATCACTGAAGTAGAGAGGCTGGA
GAAGAGCGTGCTACTGGGAGGCCCCAGCCTCTGGGCACAGAGGGGACGGGATGGGCAGGC
TGGAGGGGACGAGTTCAGAGGACTAAAGGTGGGCCAGTTAAACTGCAAGTGCAGGCATCC
CTCATTTCCTCTGTCCCTCTAGCGAGTATCCGTATCCCGGATAATGTTCAGTTGTTAGAG
CACTGCTTCCCTGAGGAACATTTTCAGAATGGAAAAGGACATAggagttcctgtcgtggc
tcactgtttaacgaatccaactaagaaccatgaggttgcaggttcgatccctggccttgc
tcagtgggttaaggatccagcattaccgtgagctgtggtgtaggtcacagacgtggctcg
gatcccatgttgctgtggctctggcgtaNG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               198-395, - strand, RNAz p=0.940328

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               198-395, - strand, RNAz p=0.940328

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               287-386, - strand, RNAmicro p=0.997756

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               287-386, - strand, RNAmicro p=0.997756

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-497, gnl|bosTau2|chr7 (21056513-21056991)
               

               
               2-497, gnl|Hg17|chr5 (131831184-131831636)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-497, gnl|bosTau2|chr7 (21056513-21056991)
               

               
               2-497, gnl|Hg17|chr5 (131831184-131831636)

	2-497, gnl\|bosTau2\|chr7 (21056513-21056991)
	2-497, gnl\|Hg17\|chr5 (131831184-131831636)