Non-Coding RNA Search

LyN1-MLN01G010027

Sequence:


               
               ATTTGTGTTATGTAATCACATCTATGATAGTCATAATTAGAATTTTTATTTGTCCATAGC
TTCTTGAGTGTAGGAACATATTCATTGGAGTATGCCAAAAGACACATGAGGTTGATCAAT
AAATATTTGTTAAATGAATGAATGAGTATAGGCTAACAAATCGATTATTAAGAATATTGC
AGCTTAAAATATAAAGAAGTGTTACCACCTTAAGTTGAGACCTTTTAACAAGAAACCATG
TACTTGTTAAAATATTGGAATCTATTTGAAATTACTTCACAGTTTGTCCTTAAAAATAGA
AATTTGTCTCATTCCTTTAGAGGGAAAGAAATTTTTTTTTCCTAGGGTTCTTCCCTCTCC
CCCTTTTCTACTCACCTTAGGTATTTCCCTTCCTCTCACATTAACCTGTAAAAAGATAAC
CAGCCCAAACCACCACTTCCCCCACTCATTGCCAGAGTACAGATGGGGAGCTAGAACTTT
ATTGCACAGACTCAGGAAGGATTTAAGCAAGTAAAGTGGGATAAATAGGTCAGAAACTAA
GGGAAACTGGCAATATAATAGAATGGCTCTGAGCTGAGGCTACAGAATTAGCAGTCATGT
GTTTGAATCTTTGCCCCAACCATTATTGTCTGATTTTGGACAATTTTAACCTATTTTAGT
TGCATAAAAGAGGTGATAATAATAATACCTAACCTACCAAGTTGTCATGGATATTAAATG
AGGTAACAATAGTACTTCTTAcaggcataccttagagacattgtggatttggttctagac
cacagcagtaaagtgactatcacaaataagcgagtcacacagattttttggtttaccagt
gcatataacaattatCTTGGAGTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTGTGTTATGTAATCACATCTATGATAGTCATAATTAGAATTTTTATTTGTCCATAGC
TTCTTGAGTGTAGGAACATATTCATTGGAGTATGCCAAAAGACACATGAGGTTGATCAAT
AAATATTTGTTAAATGAATGAATGAGTATAGGCTAACAAATCGATTATTAAGAATATTGC
AGCTTAAAATATAAAGAAGTGTTACCACCTTAAGTTGAGACCTTTTAACAAGAAACCATG
TACTTGTTAAAATATTGGAATCTATTTGAAATTACTTCACAGTTTGTCCTTAAAAATAGA
AATTTGTCTCATTCCTTTAGAGGGAAAGAAATTTTTTTTTCCTAGGGTTCTTCCCTCTCC
CCCTTTTCTACTCACCTTAGGTATTTCCCTTCCTCTCACATTAACCTGTAAAAAGATAAC
CAGCCCAAACCACCACTTCCCCCACTCATTGCCAGAGTACAGATGGGGAGCTAGAACTTT
ATTGCACAGACTCAGGAAGGATTTAAGCAAGTAAAGTGGGATAAATAGGTCAGAAACTAA
GGGAAACTGGCAATATAATAGAATGGCTCTGAGCTGAGGCTACAGAATTAGCAGTCATGT
GTTTGAATCTTTGCCCCAACCATTATTGTCTGATTTTGGACAATTTTAACCTATTTTAGT
TGCATAAAAGAGGTGATAATAATAATACCTAACCTACCAAGTTGTCATGGATATTAAATG
AGGTAACAATAGTACTTCTTAcaggcataccttagagacattgtggatttggttctagac
cacagcagtaaagtgactatcacaaataagcgagtcacacagattttttggtttaccagt
gcatataacaattatCTTGGAGTTCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               276-559, - strand, RNAz p=0.998954

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               276-559, - strand, RNAz p=0.998954

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-858, gnl|bosTau2|chr10 (39483847-39482990)
               

               
               1-858, gnl|Hg17|chr15 (54249734-54249006)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-858, gnl|bosTau2|chr10 (39483847-39482990)
               

               
               1-858, gnl|Hg17|chr15 (54249734-54249006)

	1-858, gnl\|bosTau2\|chr10 (39483847-39482990)
	1-858, gnl\|Hg17\|chr15 (54249734-54249006)