Non-Coding RNA Search

LyN1-MLN01G040084

Sequence:


               
               CAAAGTAAGGTATTGACTGCTTCTTCTTTGCTGAAGAGAAATTCTGTATGGAGAACAAAG
CTAAAGGTGTTGGTGAGATATAACACGAGGCTGTAATTTAGAGGATACGGCGTCAACGGG
GGGACCAATTTGATGTCTTTTAAGAGACAGAGAATCATTGAGCACCACCTGTCCTAGTGT
GCTGTATATTTGTTTTCTAAATTGGAGTCACTTCTTAAGAAGGAGGCAGGGGGATCTTTC
GGGGCTAAGGAGTCCAGCTCAGGTCCATGGGCCTGAACGGGCATGTCCTGTCCTGTCACT
GTGTTACTTGACATCTTTACAAGGATCCATGCTGTCCTTTTTTCCTCTGTTAGGCCTGTG
GAAGTGCCTTAAACATCACGGAGCTGTACCCATATCAAGTGTGCACCTGGCTCTTTGCTG
AGTGCATGATTAGGTAGGAGGCCCCCGACCCATAAATGTTCCCCAAATGGATAAATTTTG
ATCTTTGAGATAGATTTTTAAAGCTTTTGATCAGAAAGAGGCCTGGGGAAGTTTAGACAG
CTCCCATTGCTCCTCAGGTTTATCCTGATGCTTGAATAATTAAATCCATTCCCTGTGGGA
TTTTTCCTTCCTTAGGCTCTAGGTCGTCTTACACAAAGGCCAGCTTCTATAAATGGTACA
CTGTGCACCCTTTTAAAGCCCTCCCCAGCTTTCCACTCTGGTTGTCTTCTCGTGTTCTAA
CTGATTATCTGGACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAGTAAGGTATTGACTGCTTCTTCTTTGCTGAAGAGAAATTCTGTATGGAGAACAAAG
CTAAAGGTGTTGGTGAGATATAACACGAGGCTGTAATTTAGAGGATACGGCGTCAACGGG
GGGACCAATTTGATGTCTTTTAAGAGACAGAGAATCATTGAGCACCACCTGTCCTAGTGT
GCTGTATATTTGTTTTCTAAATTGGAGTCACTTCTTAAGAAGGAGGCAGGGGGATCTTTC
GGGGCTAAGGAGTCCAGCTCAGGTCCATGGGCCTGAACGGGCATGTCCTGTCCTGTCACT
GTGTTACTTGACATCTTTACAAGGATCCATGCTGTCCTTTTTTCCTCTGTTAGGCCTGTG
GAAGTGCCTTAAACATCACGGAGCTGTACCCATATCAAGTGTGCACCTGGCTCTTTGCTG
AGTGCATGATTAGGTAGGAGGCCCCCGACCCATAAATGTTCCCCAAATGGATAAATTTTG
ATCTTTGAGATAGATTTTTAAAGCTTTTGATCAGAAAGAGGCCTGGGGAAGTTTAGACAG
CTCCCATTGCTCCTCAGGTTTATCCTGATGCTTGAATAATTAAATCCATTCCCTGTGGGA
TTTTTCCTTCCTTAGGCTCTAGGTCGTCTTACACAAAGGCCAGCTTCTATAAATGGTACA
CTGTGCACCCTTTTAAAGCCCTCCCCAGCTTTCCACTCTGGTTGTCTTCTCGTGTTCTAA
CTGATTATCTGGACAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               80-196, + strand, RNAz p=0.987923

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-196, + strand, RNAz p=0.987923

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-694, gnl|bosTau2|chr21 (11807472-11808188)
               

               
               1-694, gnl|Hg17|chr15 (88361524-88362221)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-694, gnl|bosTau2|chr21 (11807472-11808188)
               

               
               1-694, gnl|Hg17|chr15 (88361524-88362221)

	1-694, gnl\|bosTau2\|chr21 (11807472-11808188)
	1-694, gnl\|Hg17\|chr15 (88361524-88362221)