LyN1-MLN01G060038
|
TTGGAATTTATATTATTTATTGAGATAATTGCTAATATAGTATTAAAAGTTATAGAAATC
TGGGTCTTGGGACTCAATTTTGTTCATTTTCAATATGATTATGTTTTCCTTTCGGATTTC
TGATTAGTGTATTTTTTTTTTTTTTTGTCAGTTTTGCAGTCCTGCTGAAGAGAATTAACG
TAGTTAGATACTAAAGGACAGTTGGGCTCAACTCATGCTATCCTAACTCATTTGTGTTTT
TGTCTTTCATTTCAGAGGACACATTGGTAACTCATTTAAATGAGATTACTCATGTGGGAA
TACTGAATCCTTATAGTGGGGTGCCAGGTAGTTGAACTTGGTAATGTATTTGGCAGGTGA
TTATATTTTTGTAATGTGATGTAGGAATCAGACCCACTGTTTTCTCCATTGTTCTTCAGT
ACCTAGCAGCAGAGTAGGCACTAATATTCATTGGGTAAGAGAAAGAATAAATAAAACCTA
ATGACGAAGGGTTTTGTGGAAGGACGTAAACTTATTGCTGAAAATACTGCAGTTAAAATG
AGAGATGCGGTAGGAATACAGTGGAAAGAGCGCTGAACTAGGAATCAGAAAATCTGAATT
CTAATTCCAGATCTAAAGGTGAATAGCTATGTGACCTTTAAACAAGTTTCTGGATCTTGG
TTCCTTGTTGGGTAAAGGGGAATTCAGAATAGCCACTCCTGCCTAATTCATAGATTGTTA
AGGAAATAAAGTGAAGCATTGATATAAAATGCTTCACAGATGTGCATGTA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTGGAATTTATATTATTTATTGAGATAATTGCTAATATAGTATTAAAAGTTATAGAAATC
TGGGTCTTGGGACTCAATTTTGTTCATTTTCAATATGATTATGTTTTCCTTTCGGATTTC
TGATTAGTGTATTTTTTTTTTTTTTTGTCAGTTTTGCAGTCCTGCTGAAGAGAATTAACG
TAGTTAGATACTAAAGGACAGTTGGGCTCAACTCATGCTATCCTAACTCATTTGTGTTTT
TGTCTTTCATTTCAGAGGACACATTGGTAACTCATTTAAATGAGATTACTCATGTGGGAA
TACTGAATCCTTATAGTGGGGTGCCAGGTAGTTGAACTTGGTAATGTATTTGGCAGGTGA
TTATATTTTTGTAATGTGATGTAGGAATCAGACCCACTGTTTTCTCCATTGTTCTTCAGT
ACCTAGCAGCAGAGTAGGCACTAATATTCATTGGGTAAGAGAAAGAATAAATAAAACCTA
ATGACGAAGGGTTTTGTGGAAGGACGTAAACTTATTGCTGAAAATACTGCAGTTAAAATG
AGAGATGCGGTAGGAATACAGTGGAAAGAGCGCTGAACTAGGAATCAGAAAATCTGAATT
CTAATTCCAGATCTAAAGGTGAATAGCTATGTGACCTTTAAACAAGTTTCTGGATCTTGG
TTCCTTGTTGGGTAAAGGGGAATTCAGAATAGCCACTCCTGCCTAATTCATAGATTGTTA
AGGAAATAAAGTGAAGCATTGATATAAAATGCTTCACAGATGTGCATGTA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
214-553, gnl|bosTau2|chr16 (52604879-52604543) |
|
214-553, gnl|Hg17|chr1 (209627272-209627620) |
| |
|
554-770, gnl|bosTau2|chr16 (52604359-52604143) |
|
554-770, gnl|canFam2|chr7 (14123751-14124205) |
|
554-770, gnl|dasNov1|scaffold_19475 (35613-36129) |
|
554-770, gnl|hg17|chr1 (209627622-209628085) |
|
554-770, gnl|Hg17|chr1 (209627627-209627840) |
|
554-770, gnl|loxAfr1|scaffold_24548 (5-472) |
|
554-770, gnl|panTro1|chr1 (193325799-193326262) |
|
554-770, gnl|rheMac2|chr1 (157381572-157381105) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
214-553, gnl|bosTau2|chr16 (52604879-52604543) |
|
214-553, gnl|Hg17|chr1 (209627272-209627620) |
| |
|
554-770, gnl|bosTau2|chr16 (52604359-52604143) |
|
554-770, gnl|canFam2|chr7 (14123751-14124205) |
|
554-770, gnl|dasNov1|scaffold_19475 (35613-36129) |
|
554-770, gnl|hg17|chr1 (209627622-209628085) |
|
554-770, gnl|Hg17|chr1 (209627627-209627840) |
|
554-770, gnl|loxAfr1|scaffold_24548 (5-472) |
|
554-770, gnl|panTro1|chr1 (193325799-193326262) |
|
554-770, gnl|rheMac2|chr1 (157381572-157381105) |
