LyN1-MLN01G080014
|
CTAAAAACAACAGCCAATCAAAAACAAAAACAAAAACAAGCCCCCCCCCTCCAAAAAAAA
AAAAAAAAACAACAATAGCTAAGCAAAACCCAAATGAAATGCTATACCTTTATGAGGCAT
GTCCTGGGTGCTGTGTACAGTGCGGGACCTTGGTGGAACCAGAAGTCCTCTGCTCCCCAT
TTATTCCTCCATCCCTTGGATACTGGCTGTGACCTTGGCTCAGTGTTCTGTGTAGGATGC
ACAGGGCTAACAGGATGTGCATTGTCCAAGGAGCCCATATCTGTGGTGGGGAATGGGAGG
TGGTGGCGGAGCAGACAAACTAAATAAATAAGCTCGCAAATGAATACATAATTACAAATT
GTCAAAAGTGATATTAAGGGGAAAAAAACAGGATGCTGAGAAAGAATAATGAGAATGGAA
GTTGGGGGAAGACCTAATTAAATTTAATTTAGATGAAGTGGTGGAGGTCAGGGAAGCCAT
CTCTTTGATGGTGACATTTAAGCAGAGCCCTGAAAGATGAGTAGCAATTAACCAGGTGGG
AAGGAGCCTGCTGCAGGCGGCTGGGGCAGGAGCAAAGAGGGAGAGCTGGAAATAGGCCCA
ATGGGGCAAGCGGAGGAGGGCTGGAGCCCCTCCGAGGTGTGGGGTTTTATCCCAACACAC
AATACACAGTGAGTAGAGGGAACGGGGTCAGGTTTTTGTGGTAAAAATCTCTCACGTTTG
GAGTTCCCATTGTGGTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTAAAAACAACAGCCAATCAAAAACAAAAACAAAAACAAGCCCCCCCCCTCCAAAAAAAA
AAAAAAAAACAACAATAGCTAAGCAAAACCCAAATGAAATGCTATACCTTTATGAGGCAT
GTCCTGGGTGCTGTGTACAGTGCGGGACCTTGGTGGAACCAGAAGTCCTCTGCTCCCCAT
TTATTCCTCCATCCCTTGGATACTGGCTGTGACCTTGGCTCAGTGTTCTGTGTAGGATGC
ACAGGGCTAACAGGATGTGCATTGTCCAAGGAGCCCATATCTGTGGTGGGGAATGGGAGG
TGGTGGCGGAGCAGACAAACTAAATAAATAAGCTCGCAAATGAATACATAATTACAAATT
GTCAAAAGTGATATTAAGGGGAAAAAAACAGGATGCTGAGAAAGAATAATGAGAATGGAA
GTTGGGGGAAGACCTAATTAAATTTAATTTAGATGAAGTGGTGGAGGTCAGGGAAGCCAT
CTCTTTGATGGTGACATTTAAGCAGAGCCCTGAAAGATGAGTAGCAATTAACCAGGTGGG
AAGGAGCCTGCTGCAGGCGGCTGGGGCAGGAGCAAAGAGGGAGAGCTGGAAATAGGCCCA
ATGGGGCAAGCGGAGGAGGGCTGGAGCCCCTCCGAGGTGTGGGGTTTTATCCCAACACAC
AATACACAGTGAGTAGAGGGAACGGGGTCAGGTTTTTGTGGTAAAAATCTCTCACGTTTG
GAGTTCCCATTGTGGTG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
68-442, gnl|bosTau2|chr28 (29335800-29335422) |
|
68-442, gnl|Hg17|chr10 (49638733-49639110) |
| |
|
450-718, gnl|bosTau2|chr28 (29335207-29334935) |
|
450-718, gnl|canFam2|chr28 (3680287-3680459) |
|
450-718, gnl|dasNov1|scaffold_12477 (28372-28185) |
|
450-718, gnl|echTel1|scaffold_52011 (928-1103) |
|
450-718, gnl|hg17|chr10 (49639113-49639316) |
|
450-718, gnl|Hg17|chr10 (49639118-49639416) |
|
450-718, gnl|oryCun1|scaffold_172631 (526-350) |
|
450-718, gnl|panTro1|chr8 (49970207-49970410) |
|
450-718, gnl|rheMac2|chr9 (47853491-47853288) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
68-442, gnl|bosTau2|chr28 (29335800-29335422) |
|
68-442, gnl|Hg17|chr10 (49638733-49639110) |
| |
|
450-718, gnl|bosTau2|chr28 (29335207-29334935) |
|
450-718, gnl|canFam2|chr28 (3680287-3680459) |
|
450-718, gnl|dasNov1|scaffold_12477 (28372-28185) |
|
450-718, gnl|echTel1|scaffold_52011 (928-1103) |
|
450-718, gnl|hg17|chr10 (49639113-49639316) |
|
450-718, gnl|Hg17|chr10 (49639118-49639416) |
|
450-718, gnl|oryCun1|scaffold_172631 (526-350) |
|
450-718, gnl|panTro1|chr8 (49970207-49970410) |
|
450-718, gnl|rheMac2|chr9 (47853491-47853288) |
