LyN1-MLN01G100048
|
AAAAAGCACTCAGGATGATCCTTTGTGCAACATGCTCCCCTCCCGCTCAGAGCACCATGC
GTGCAAATCGAGGAGAGGCATCTTCCAAGCCATCCAGAGCTGAAGATCTGCAGGTCACTG
TGCGACTCTAACAGCAGCCCAGTGGAGAGCTGAGCTGGAGAAAACTGAACACAATGGCTG
GAGGGATGCAGGGTGCATGCTGGCCGCCAGGTTTCAGTTACAGACAGAAAGGGCAGCCCC
CTGGTGCCACCAGCCCATGGTTCCTTGCGTGGTACCTCGTCTGGTGCTGGGCACAGGATT
CTGGCCTCGGAGGGGCCCAGAGAAGGAAAGGAATTTGCCCAAGATCACAGAGCCAGCCAT
CAGCAGAACTGAGCTAAAGAATGCCATGGGAGAGCATTATGACTGATGGGATGTGAGTGG
AAATGACAGAGAGGAACTCCCAGAAAATCTCCTAAAACAAGGCTTCACACACTTATTTTG
TTCTTTACTCCTCCAGTTTTCCCTATCTGAACATGGACACGATGGCTGGCATTCCAGCAG
TCATTTTGACAACCAGAGGGCCAGAGTTATACACTATGGATAGTGAAACACAAAGCTAGA
AGACCCAGAGTCTTTGATGGCATCTGGGAGCTGCCAGACAACTCTGAGTGCCATTTCTTA
AATGTATTGTACGTAAGAGAAAAATAACCCCCTAATATCTTCAAGAAACTTTTGTTGCTG
TTGTTTCACTTTTTCATTTCTGTTACTAGCAACCAAAGAGAATTCATAACTTAGATAGTA
GGCCAGCCAAAGTACTATAAATGAAGCTAAGCTTAAGAATATTTCCTATGTAACAGGAAG
CATTAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAAAGCACTCAGGATGATCCTTTGTGCAACATGCTCCCCTCCCGCTCAGAGCACCATGC
GTGCAAATCGAGGAGAGGCATCTTCCAAGCCATCCAGAGCTGAAGATCTGCAGGTCACTG
TGCGACTCTAACAGCAGCCCAGTGGAGAGCTGAGCTGGAGAAAACTGAACACAATGGCTG
GAGGGATGCAGGGTGCATGCTGGCCGCCAGGTTTCAGTTACAGACAGAAAGGGCAGCCCC
CTGGTGCCACCAGCCCATGGTTCCTTGCGTGGTACCTCGTCTGGTGCTGGGCACAGGATT
CTGGCCTCGGAGGGGCCCAGAGAAGGAAAGGAATTTGCCCAAGATCACAGAGCCAGCCAT
CAGCAGAACTGAGCTAAAGAATGCCATGGGAGAGCATTATGACTGATGGGATGTGAGTGG
AAATGACAGAGAGGAACTCCCAGAAAATCTCCTAAAACAAGGCTTCACACACTTATTTTG
TTCTTTACTCCTCCAGTTTTCCCTATCTGAACATGGACACGATGGCTGGCATTCCAGCAG
TCATTTTGACAACCAGAGGGCCAGAGTTATACACTATGGATAGTGAAACACAAAGCTAGA
AGACCCAGAGTCTTTGATGGCATCTGGGAGCTGCCAGACAACTCTGAGTGCCATTTCTTA
AATGTATTGTACGTAAGAGAAAAATAACCCCCTAATATCTTCAAGAAACTTTTGTTGCTG
TTGTTTCACTTTTTCATTTCTGTTACTAGCAACCAAAGAGAATTCATAACTTAGATAGTA
GGCCAGCCAAAGTACTATAAATGAAGCTAAGCTTAAGAATATTTCCTATGTAACAGGAAG
CATTAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
104-313, gnl|bosTau2|chr6 (66580452-66580660) |
|
104-313, gnl|canFam2|chr11 (37578006-37578586) |
|
104-313, gnl|dasNov1|scaffold_525 (122906-122311) |
|
104-313, gnl|echTel1|scaffold_215826 (2873-3460) |
|
104-313, gnl|galGal2|chrUn (55568614-55569281) |
|
104-313, gnl|hg17|chr9 (14048113-14048712) |
|
104-313, gnl|Hg17|chr9 (14048253-14048473) |
|
104-313, gnl|mm7|chr4 (81671876-81672461) |
|
104-313, gnl|Mm7|chr4 (81672016-81672228) |
|
104-313, gnl|monDom2|scaffold_5 (100388544-100387894) |
|
104-313, gnl|oryCun1|scaffold_173921 (111122-111719) |
|
104-313, gnl|panTro1|chr11 (14250148-14250748) |
|
104-313, gnl|rheMac2|chr15 (62875503-62874906) |
|
104-313, gnl|rn3|chr5 (101160324-101160897) |
| |
|
372-846, gnl|bosTau2|chr6 (66590917-66591392) |
|
372-846, gnl|Hg17|chr9 (14056213-14056972) |
|
372-846, gnl|Mm7|chr4 (81679412-81679882) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
104-313, gnl|bosTau2|chr6 (66580452-66580660) |
|
104-313, gnl|canFam2|chr11 (37578006-37578586) |
|
104-313, gnl|dasNov1|scaffold_525 (122906-122311) |
|
104-313, gnl|echTel1|scaffold_215826 (2873-3460) |
|
104-313, gnl|galGal2|chrUn (55568614-55569281) |
|
104-313, gnl|hg17|chr9 (14048113-14048712) |
|
104-313, gnl|Hg17|chr9 (14048253-14048473) |
|
104-313, gnl|mm7|chr4 (81671876-81672461) |
|
104-313, gnl|Mm7|chr4 (81672016-81672228) |
|
104-313, gnl|monDom2|scaffold_5 (100388544-100387894) |
|
104-313, gnl|oryCun1|scaffold_173921 (111122-111719) |
|
104-313, gnl|panTro1|chr11 (14250148-14250748) |
|
104-313, gnl|rheMac2|chr15 (62875503-62874906) |
|
104-313, gnl|rn3|chr5 (101160324-101160897) |
| |
|
372-846, gnl|bosTau2|chr6 (66590917-66591392) |
|
372-846, gnl|Hg17|chr9 (14056213-14056972) |
|
372-846, gnl|Mm7|chr4 (81679412-81679882) |
