Non-Coding RNA Search

LyN1-MLN01G120071

Sequence:


               
               TGTTGAGTAAGTATTGAATATTCATTATTTCCTATGTTATGGGTAATAACTGCTTAACAT
AGGTGGTTAATGAATTGGTACTGATGAATTATTTTGTTTCTTTACTAGGAACACGAATCT
GAAGGTGGAAGAACACCTTTGATGAAAGCGGCAAGAGCTGGTCATTTGTGTACCGTGCAG
TTTCTTATTAGCAAAGGTAAAGACAGTACAAGTGAACATTTCCAAGGGGCTACAACTTAC
CAAAAAAAGTTCCTACTCTTGCAATTTATGTTAAAGCTACTTTACCTATAGTATAGTGTA
TACTACTGTATTCTAGTCTTTTGTTGCTATATTTTATTACAAAGCATAGAGTTCCTAAGG
TAATTACTGGGATCTTTATTAGTTTTGAGTTTGAAGTTTTCATCAACCAAACAGCATATT
GTTGCTCCCAAAAGTTGGAAAAGTCAAATGTAAAATGTCCGGCTATGTTTCGTAGGTAGA
GTATTGTTTGGCACTAATGACAAGGCAGTTCTGCTGAAAATGGGGAAGGGTAAGGGGGAA
AGTCTGCTGCTCTTGTGTATGGTACAGTTACATATGTATACATATTTACATATGTATGTA
CATGTGCATACAAGGTTGTTATTGTTATCTTCCTCTAGAGATAATATTATTAGAGTATAT
TTGGGCAAAAAAATTCAAATGATAGATAAGAGTTAGTTCAAGACTGTTTACTGTAGAAAA
ATGAATTGCTGCTGAACTCATTTTANGTCCAAACATAAAATTGTCATTGTATACAGCAAA
GATGGTAACATCAGCCATTTCATTTTATTCAGCCTAACTCTGTGTAATGCTAGAGGTACT
CTGGCATCCGATAAAAATCCTANGCATTCGCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTGAGTAAGTATTGAATATTCATTATTTCCTATGTTATGGGTAATAACTGCTTAACAT
AGGTGGTTAATGAATTGGTACTGATGAATTATTTTGTTTCTTTACTAGGAACACGAATCT
GAAGGTGGAAGAACACCTTTGATGAAAGCGGCAAGAGCTGGTCATTTGTGTACCGTGCAG
TTTCTTATTAGCAAAGGTAAAGACAGTACAAGTGAACATTTCCAAGGGGCTACAACTTAC
CAAAAAAAGTTCCTACTCTTGCAATTTATGTTAAAGCTACTTTACCTATAGTATAGTGTA
TACTACTGTATTCTAGTCTTTTGTTGCTATATTTTATTACAAAGCATAGAGTTCCTAAGG
TAATTACTGGGATCTTTATTAGTTTTGAGTTTGAAGTTTTCATCAACCAAACAGCATATT
GTTGCTCCCAAAAGTTGGAAAAGTCAAATGTAAAATGTCCGGCTATGTTTCGTAGGTAGA
GTATTGTTTGGCACTAATGACAAGGCAGTTCTGCTGAAAATGGGGAAGGGTAAGGGGGAA
AGTCTGCTGCTCTTGTGTATGGTACAGTTACATATGTATACATATTTACATATGTATGTA
CATGTGCATACAAGGTTGTTATTGTTATCTTCCTCTAGAGATAATATTATTAGAGTATAT
TTGGGCAAAAAAATTCAAATGATAGATAAGAGTTAGTTCAAGACTGTTTACTGTAGAAAA
ATGAATTGCTGCTGAACTCATTTTANGTCCAAACATAAAATTGTCATTGTATACAGCAAA
GATGGTAACATCAGCCATTTCATTTTATTCAGCCTAACTCTGTGTAATGCTAGAGGTACT
CTGGCATCCGATAAAAATCCTANGCATTCGCGT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               79-194, + strand, RNAz p=0.563882

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               79-194, + strand, RNAz p=0.563882

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AF521882, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AF521882, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-563, gnl|bosTau2|chr7 (30629030-30628481)
               

               
               3-563, gnl|Hg17|chr5 (139842239-139842803)
               

               
               3-563, gnl|Mm7|chr18 (36987935-36988417)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-563, gnl|bosTau2|chr7 (30629030-30628481)
               

               
               3-563, gnl|Hg17|chr5 (139842239-139842803)
               

               
               3-563, gnl|Mm7|chr18 (36987935-36988417)

	3-563, gnl\|bosTau2\|chr7 (30629030-30628481)
	3-563, gnl\|Hg17\|chr5 (139842239-139842803)
	3-563, gnl\|Mm7\|chr18 (36987935-36988417)