LyN1-MLN01G120077
|
GTTGGGATATTGTGTGAATTACCCAGGTTGTCCCTATCACTTACCCTACCTTTGTCTTTG
GTAGCTCCGTGTGCATTAAAAATAAAAGACAAAAAAAGTAGCTTTTAGGGAATGGAAAGA
AAATATAAAATAGCCCTCTATTACCTGGTTGGTTTTGGCTAAGTCCTTTATGGCGTTTGT
TTGTTTTTCATCCTGGGGCTTCACACGGAGTACCTTCTCCCTTGAAGAATACAAAAGATG
CAACATGCGAACTGCAAAGAAGTATTTCTTAGTCCTCTTTTCACACGGAATCTGAAACAA
GGGGCAGTGAGATTTACCTGTCAAAAGAGACATGAGCGAAAGCAAGAATGGTAGTGATTA
AACCCACAGCCAGGATGAACCGTGTGGTTCTTCTGTGCTTGCCCCAAGAAGACCCTCTGC
CAGTTTTATGCCTCAGCTCTTATCTGGAGGTACAACTCATTTCCTCTTGGGGTTCTGGTG
GGTGACATGTTCCCCCTATATTTTCTAGTTGGGGAGGAACACTAACACTAAATGCCTACT
TTGTGTCAGGTAAGTGCTATGCACTCATATACCTTTTATAATTGGAAATACCCATTTTAC
AGGTGGGATGAGAGGCAAATTCCATGTTTAGCAAATAATTTGCCCAGGTAGCAGAGTTAT
TATGTTCACAGAGTTGAGATTTGAACCCAGTTCTTTGTTCTAAAATATTACTCAGAggag
ttcccatcgtggcgcagtggatatgaatctgactaggaaccatgaggttgaggattcaat
ccttggcctcgctcagtgagttaaagatctggtgttgccatgatctgtggtgtaggttga
agacacagctcggatc
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTTGGGATATTGTGTGAATTACCCAGGTTGTCCCTATCACTTACCCTACCTTTGTCTTTG
GTAGCTCCGTGTGCATTAAAAATAAAAGACAAAAAAAGTAGCTTTTAGGGAATGGAAAGA
AAATATAAAATAGCCCTCTATTACCTGGTTGGTTTTGGCTAAGTCCTTTATGGCGTTTGT
TTGTTTTTCATCCTGGGGCTTCACACGGAGTACCTTCTCCCTTGAAGAATACAAAAGATG
CAACATGCGAACTGCAAAGAAGTATTTCTTAGTCCTCTTTTCACACGGAATCTGAAACAA
GGGGCAGTGAGATTTACCTGTCAAAAGAGACATGAGCGAAAGCAAGAATGGTAGTGATTA
AACCCACAGCCAGGATGAACCGTGTGGTTCTTCTGTGCTTGCCCCAAGAAGACCCTCTGC
CAGTTTTATGCCTCAGCTCTTATCTGGAGGTACAACTCATTTCCTCTTGGGGTTCTGGTG
GGTGACATGTTCCCCCTATATTTTCTAGTTGGGGAGGAACACTAACACTAAATGCCTACT
TTGTGTCAGGTAAGTGCTATGCACTCATATACCTTTTATAATTGGAAATACCCATTTTAC
AGGTGGGATGAGAGGCAAATTCCATGTTTAGCAAATAATTTGCCCAGGTAGCAGAGTTAT
TATGTTCACAGAGTTGAGATTTGAACCCAGTTCTTTGTTCTAAAATATTACTCAGAggag
ttcccatcgtggcgcagtggatatgaatctgactaggaaccatgaggttgaggattcaat
ccttggcctcgctcagtgagttaaagatctggtgttgccatgatctgtggtgtaggttga
agacacagctcggatc
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
44-496, gnl|bosTau2|chr17 (16455232-16455677) |
|
44-496, gnl|Hg17|chr3 (150066142-150065685) |
|
44-496, gnl|Mm7|chr3 (19973723-19974187) |
| |
|
507-642, gnl|bosTau2|chr17 (16455715-16455852) |
|
507-642, gnl|canFam2|chr23 (46770493-46770674) |
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507-642, gnl|dasNov1|scaffold_8608 (2625-2450) |
|
507-642, gnl|echTel1|scaffold_317895 (42784-42599) |
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507-642, gnl|hg17|chr3 (150065537-150065713) |
|
507-642, gnl|loxAfr1|scaffold_5566 (65830-65638) |
|
507-642, gnl|mm7|chr3 (19974386-19974168) |
|
507-642, gnl|oryCun1|scaffold_178532 (30012-30193) |
|
507-642, gnl|panTro1|chr2 (153103747-153103925) |
|
507-642, gnl|rheMac2|chr2 (138926533-138926350) |
|
507-642, gnl|rn3|chr2 (105347857-105347699) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
44-496, gnl|bosTau2|chr17 (16455232-16455677) |
|
44-496, gnl|Hg17|chr3 (150066142-150065685) |
|
44-496, gnl|Mm7|chr3 (19973723-19974187) |
| |
|
507-642, gnl|bosTau2|chr17 (16455715-16455852) |
|
507-642, gnl|canFam2|chr23 (46770493-46770674) |
|
507-642, gnl|dasNov1|scaffold_8608 (2625-2450) |
|
507-642, gnl|echTel1|scaffold_317895 (42784-42599) |
|
507-642, gnl|hg17|chr3 (150065537-150065713) |
|
507-642, gnl|loxAfr1|scaffold_5566 (65830-65638) |
|
507-642, gnl|mm7|chr3 (19974386-19974168) |
|
507-642, gnl|oryCun1|scaffold_178532 (30012-30193) |
|
507-642, gnl|panTro1|chr2 (153103747-153103925) |
|
507-642, gnl|rheMac2|chr2 (138926533-138926350) |
|
507-642, gnl|rn3|chr2 (105347857-105347699) |
