Non-Coding RNA Search

LyN1-MLN01H010041

Sequence:


               
               TTTTCCAACCTGGTCTCGAAGAACCCTAATAGTCATAGGATGCTCTGAAAATAGCGCACA
CATAATATATGCCAATTTACAGGAATTGGCACATTGGACTAAATAAGACTGGGGATCAGT
AGCACTATAGGAATTATTATTGAAGACCCAGCTTTCTCCTTTTCCTATATTCAGTCTGCC
ATGCAGAAGAGACCAGTTCCTTCCATCAGATTTTGGCTGTTTGATACTTTATTTTGCCTC
ATGACTAGAGAAATGAAGGTGATGGCCAGGTGACTTGACGTATAGGTATTTAGTTGATAT
CTAAGTGGGCATCTTGTAGAAGACACTCAAAAGTAATGCATATAAAGAAAGGTTGAGATA
CAGTTTCACATAGCTCTTTATTCAGATTGTAAGTAATAGAAATAAATCAATTTGTACCAA
TTCAAAACTTGTTTACCTGATCAGGCTGAATCGGTTTCATTCTAAATGATTTACTCTGGC
TGGATGTTGAACAGACTTTCAACTGAATCCTGATCGTTGCTTGCTTTATGTGAGGTGGCC
TGGGGAAAGGGTATGGGTGCCTTTCTCATGAAAGAATGTGGAAAGCAAAATCTTAACTAA
TCACCATTTACATAGGCTTTGGTTGAATAAAATTTTTTTCTGTATTGCTTTAGCCAGAGT
CAGCTGCATTACTGCCAAATACAGAACAGCAAATTGGCCTCCAGTCTCTCCTGCCTGGAC
TCTGTAGCCATGCCTACTGCAAGTGAGAAGCTTCTTAGTGGCTATTCAGGCAGGCTTAAG
TAGGAATCCACCACTTCATTAGGAATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCCAACCTGGTCTCGAAGAACCCTAATAGTCATAGGATGCTCTGAAAATAGCGCACA
CATAATATATGCCAATTTACAGGAATTGGCACATTGGACTAAATAAGACTGGGGATCAGT
AGCACTATAGGAATTATTATTGAAGACCCAGCTTTCTCCTTTTCCTATATTCAGTCTGCC
ATGCAGAAGAGACCAGTTCCTTCCATCAGATTTTGGCTGTTTGATACTTTATTTTGCCTC
ATGACTAGAGAAATGAAGGTGATGGCCAGGTGACTTGACGTATAGGTATTTAGTTGATAT
CTAAGTGGGCATCTTGTAGAAGACACTCAAAAGTAATGCATATAAAGAAAGGTTGAGATA
CAGTTTCACATAGCTCTTTATTCAGATTGTAAGTAATAGAAATAAATCAATTTGTACCAA
TTCAAAACTTGTTTACCTGATCAGGCTGAATCGGTTTCATTCTAAATGATTTACTCTGGC
TGGATGTTGAACAGACTTTCAACTGAATCCTGATCGTTGCTTGCTTTATGTGAGGTGGCC
TGGGGAAAGGGTATGGGTGCCTTTCTCATGAAAGAATGTGGAAAGCAAAATCTTAACTAA
TCACCATTTACATAGGCTTTGGTTGAATAAAATTTTTTTCTGTATTGCTTTAGCCAGAGT
CAGCTGCATTACTGCCAAATACAGAACAGCAAATTGGCCTCCAGTCTCTCCTGCCTGGAC
TCTGTAGCCATGCCTACTGCAAGTGAGAAGCTTCTTAGTGGCTATTCAGGCAGGCTTAAG
TAGGAATCCACCACTTCATTAGGAATGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-119, - strand, RNAz p=0.837084

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-119, - strand, RNAz p=0.837084

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-808, gnl|bosTau2|chr2 (19103673-19102865)
               

               
               1-808, gnl|Hg17|chrX (95752230-95753001)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-808, gnl|bosTau2|chr2 (19103673-19102865)
               

               
               1-808, gnl|Hg17|chrX (95752230-95753001)

	1-808, gnl\|bosTau2\|chr2 (19103673-19102865)
	1-808, gnl\|Hg17\|chrX (95752230-95753001)