LyN1-MLN01H040002
|
TCATTTTATATGAAAGTTTGAAAATCATTGACTAAAAAGGGGTCGATGCCACAAGAAGCA
TTTTTATGAGTTAAAAATTACCTTCTCAAGAACTTCTTTTGCATTTGTAGCTGAATTCTA
TTTGGCTTAGATTTTCCTGGTAGATTTTGCAAATGGTATTTTGTTTGTTTGTTTGTTTAA
tggctgcacctgcagcatgtggacgttcccaggccagggactgaatctgagcctcagctt
ggacctacatctcagctacagcaacactggatcctttaaccctctgtgccactgggctgg
ggatcgaacctgcacctccataggaacctgagctgctgTAAGCCAAATTTTTAACCACTG
TGCCACAGTAGGAACTCTGGAAATGGTGTTTTAAATCGTGGTTATTGATTAAAGGAAGTT
TTAATGGCAATGACTCTCAAGCTTTAGTGAGCCTAAGAATCACTGAGTGCTTGTCCAAAA
TGTGGATTCTCAGGCTCACCCTGTTAAGGGTATGACTTAGTAGGTCTTGCATGGGCCTAG
AAATCTTTATATTTTTTTACTGCCTTGCCAGGTGTGGGTAATGGAACCCACACACCCAAC
CCACACCTGGAGTGAAACTACCAACCTTGAATTCTCGGTTCATTTTATGTATAGCCATTA
GCTAAGACTATACTAACAggagtgctcgtcatggctcagtcgttaacaaatctgactagc
atccatgaggatgcagtttcaatccctggccttcttagtgggtttaggatctggattgct
gtgagctgtggtgtaggctgcagatATGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCATTTTATATGAAAGTTTGAAAATCATTGACTAAAAAGGGGTCGATGCCACAAGAAGCA
TTTTTATGAGTTAAAAATTACCTTCTCAAGAACTTCTTTTGCATTTGTAGCTGAATTCTA
TTTGGCTTAGATTTTCCTGGTAGATTTTGCAAATGGTATTTTGTTTGTTTGTTTGTTTAA
tggctgcacctgcagcatgtggacgttcccaggccagggactgaatctgagcctcagctt
ggacctacatctcagctacagcaacactggatcctttaaccctctgtgccactgggctgg
ggatcgaacctgcacctccataggaacctgagctgctgTAAGCCAAATTTTTAACCACTG
TGCCACAGTAGGAACTCTGGAAATGGTGTTTTAAATCGTGGTTATTGATTAAAGGAAGTT
TTAATGGCAATGACTCTCAAGCTTTAGTGAGCCTAAGAATCACTGAGTGCTTGTCCAAAA
TGTGGATTCTCAGGCTCACCCTGTTAAGGGTATGACTTAGTAGGTCTTGCATGGGCCTAG
AAATCTTTATATTTTTTTACTGCCTTGCCAGGTGTGGGTAATGGAACCCACACACCCAAC
CCACACCTGGAGTGAAACTACCAACCTTGAATTCTCGGTTCATTTTATGTATAGCCATTA
GCTAAGACTATACTAACAggagtgctcgtcatggctcagtcgttaacaaatctgactagc
atccatgaggatgcagtttcaatccctggccttcttagtgggtttaggatctggattgct
gtgagctgtggtgtaggctgcagatATGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
27-161, gnl|bosTau2|chr3 (15215799-15215668) |
|
27-161, gnl|canFam2|chr17 (63736658-63736990) |
|
27-161, gnl|hg17|chr1 (148402098-148402399) |
|
27-161, gnl|Hg17|chr1 (148402130-148402289) |
|
27-161, gnl|loxAfr1|scaffold_106128 (64-363) |
|
27-161, gnl|mm7|chr3 (94452429-94452155) |
|
27-161, gnl|Mm7|chr3 (94452407-94452258) |
|
27-161, gnl|monDom2|scaffold_44 (4919587-4919859) |
|
27-161, gnl|oryCun1|scaffold_172939 (23285-22980) |
|
27-161, gnl|panTro1|chr1 (130152253-130152554) |
|
27-161, gnl|rheMac2|chr1 (130054017-130054315) |
|
27-161, gnl|rn3|chr2 (189503465-189503187) |
| |
|
378-648, gnl|bosTau2|chr3 (15215681-15215411) |
|
378-648, gnl|Hg17|chr1 (148402271-148402556) |
|
378-648, gnl|Mm7|chr3 (94452271-94451988) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
27-161, gnl|bosTau2|chr3 (15215799-15215668) |
|
27-161, gnl|canFam2|chr17 (63736658-63736990) |
|
27-161, gnl|hg17|chr1 (148402098-148402399) |
|
27-161, gnl|Hg17|chr1 (148402130-148402289) |
|
27-161, gnl|loxAfr1|scaffold_106128 (64-363) |
|
27-161, gnl|mm7|chr3 (94452429-94452155) |
|
27-161, gnl|Mm7|chr3 (94452407-94452258) |
|
27-161, gnl|monDom2|scaffold_44 (4919587-4919859) |
|
27-161, gnl|oryCun1|scaffold_172939 (23285-22980) |
|
27-161, gnl|panTro1|chr1 (130152253-130152554) |
|
27-161, gnl|rheMac2|chr1 (130054017-130054315) |
|
27-161, gnl|rn3|chr2 (189503465-189503187) |
| |
|
378-648, gnl|bosTau2|chr3 (15215681-15215411) |
|
378-648, gnl|Hg17|chr1 (148402271-148402556) |
|
378-648, gnl|Mm7|chr3 (94452271-94451988) |
