Non-Coding RNA Search

LyN1-MLN01H040100

Sequence:


               
               AAAACATTTAGCATTTCCACGGAAAACAGTTTTGTAGCGATGTAGTACTCTGCCCTGCAC
ATTTTGACGATCCAACTGCAGATGGAATCAGTATTAGCCATCTTGAGTATCCTTGGATTT
TGTCAGGGGAGAATTGATTTAGACTGACTAGGTGGGCCTCTAATAATAATCTCTTTCAGC
TCTTTAAGTTTCTGTAATCTGTATAAATACAAAATAAGGGCATGTAATATATTTTTCTGA
GTAATCAAAGTCAGTTATTTGGCTTTGGACTATATTAGATTTTTGATCTACATCGTCTTT
AAACCTAGCTTCCATCCCTGCTGTGCTGTTGGAAGTTTTGAGTACTGATAGTTGTCAGAG
GAAAGAGGAAAATATAATGATTAATCCACAAAGTGTATGTTAGTTGATTATATGCCAATT
ATTCTCATTTTTTAAATCCTTCAGGTAATCTAGTAATAGAGAGTAAACCAGCTCCTGGTT
ATACTCCTAATGTTGTAGTTGGGCAAGTTCCTCCAGGAACAAACCACATTAGTAAAACCC
CTGGGCAGATTAACTTAGCACAGCTTCGACTTCAGCACATGCAACAACAAGTGTATGCAC
AGAAGCATCAGCAGTTGCAACAGATGAGGATGCAGCAACCACCTGCACCTGTACCAACAA
CAACAGCAACAACACAGCAGCACCCTAGACAAGCAGCCCCTCAGATGTTACAACAACAGG
TAAGCATTATATCATATTATTGATATAAATTACCCTCTGTCCTATACAGATAAGTTACAC
ATTTCAAAGTTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAACATTTAGCATTTCCACGGAAAACAGTTTTGTAGCGATGTAGTACTCTGCCCTGCAC
ATTTTGACGATCCAACTGCAGATGGAATCAGTATTAGCCATCTTGAGTATCCTTGGATTT
TGTCAGGGGAGAATTGATTTAGACTGACTAGGTGGGCCTCTAATAATAATCTCTTTCAGC
TCTTTAAGTTTCTGTAATCTGTATAAATACAAAATAAGGGCATGTAATATATTTTTCTGA
GTAATCAAAGTCAGTTATTTGGCTTTGGACTATATTAGATTTTTGATCTACATCGTCTTT
AAACCTAGCTTCCATCCCTGCTGTGCTGTTGGAAGTTTTGAGTACTGATAGTTGTCAGAG
GAAAGAGGAAAATATAATGATTAATCCACAAAGTGTATGTTAGTTGATTATATGCCAATT
ATTCTCATTTTTTAAATCCTTCAGGTAATCTAGTAATAGAGAGTAAACCAGCTCCTGGTT
ATACTCCTAATGTTGTAGTTGGGCAAGTTCCTCCAGGAACAAACCACATTAGTAAAACCC
CTGGGCAGATTAACTTAGCACAGCTTCGACTTCAGCACATGCAACAACAAGTGTATGCAC
AGAAGCATCAGCAGTTGCAACAGATGAGGATGCAGCAACCACCTGCACCTGTACCAACAA
CAACAGCAACAACACAGCAGCACCCTAGACAAGCAGCCCCTCAGATGTTACAACAACAGG
TAAGCATTATATCATATTATTGATATAAATTACCCTCTGTCCTATACAGATAAGTTACAC
ATTTCAAAGTTAC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               426-583, - strand, RNAz p=0.973535

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               426-583, - strand, RNAz p=0.973535

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               41-752, gnl|bosTau2|chr3 (26736661-26737367)
               

               
               41-752, gnl|Hg17|chr1 (114680801-114680077)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-752, gnl|bosTau2|chr3 (26736661-26737367)
               

               
               41-752, gnl|Hg17|chr1 (114680801-114680077)

	41-752, gnl\|bosTau2\|chr3 (26736661-26737367)
	41-752, gnl\|Hg17\|chr1 (114680801-114680077)