Non-Coding RNA Search

LyN1-MLN01H060072

Sequence:


               
               CTATTCTGTTCTGCATATTATGAACCTTCCATACAAAATCTGAGAGGAGCAGACATTCCG
TGGTGATGTAGGGACTCTTTAATGTTTCCAAAATGACAGTTCTTTCCCCCTAGAATAGAT
GAGTATGCTGTTCACTTGACTGTAACTCCCAAATGTCTACAGCTCAGGTTGAGTGGCCAA
TATCACATTAGAGAAGATGTGCATTAAAGTTTTGTGCAATTTGCTCAGTATGAGTTTGAA
AAACGGTGACTGCCAGTAACGGAATTTCCATTGAACAGTGGATTAAACATGACTTTTCTC
ACATAAACTTTCTGAAAGAAGGAAGTTCATCTGGAGCAGTGACTTAATAATATAACCAAG
GAGTGCTGGTACTTTCCAGTGTTCTGTTCTCCATCTCTAGCACATGGACTTTTTGGTCTG
TTGGCTTAACTCAGTGATCACAGGACGGTTGCTGTAGTGCTATACATCATGTCCTCATGT
AATTGTTCAAGGCAGGAAGAGGATGGGAAGATAAAAGGGAGTTTTTATTTTAGGTGGAAA
ACCTTTGTGACAAAGCTCCTAACAGAATTCTTCATTTTTGTCCTTTTGGCCAGATCTGGA
TTGCCTGGCCATTCCTGCTTGCCTTGGAGGCTGGGACATCTAGGATCTAGCAAAAGGGAA
TGATAGTTCCATGTGCTATTGGTAAAAGTTTGTATTCCGTCAGTGTTTTTTTGTTTTTGT
TTTTGGTCTTTTTTTGGTCTTTTTTTTGTCTTTTTAGGGCTGCACCCGAGGCATATGGAA
G

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTATTCTGTTCTGCATATTATGAACCTTCCATACAAAATCTGAGAGGAGCAGACATTCCG
TGGTGATGTAGGGACTCTTTAATGTTTCCAAAATGACAGTTCTTTCCCCCTAGAATAGAT
GAGTATGCTGTTCACTTGACTGTAACTCCCAAATGTCTACAGCTCAGGTTGAGTGGCCAA
TATCACATTAGAGAAGATGTGCATTAAAGTTTTGTGCAATTTGCTCAGTATGAGTTTGAA
AAACGGTGACTGCCAGTAACGGAATTTCCATTGAACAGTGGATTAAACATGACTTTTCTC
ACATAAACTTTCTGAAAGAAGGAAGTTCATCTGGAGCAGTGACTTAATAATATAACCAAG
GAGTGCTGGTACTTTCCAGTGTTCTGTTCTCCATCTCTAGCACATGGACTTTTTGGTCTG
TTGGCTTAACTCAGTGATCACAGGACGGTTGCTGTAGTGCTATACATCATGTCCTCATGT
AATTGTTCAAGGCAGGAAGAGGATGGGAAGATAAAAGGGAGTTTTTATTTTAGGTGGAAA
ACCTTTGTGACAAAGCTCCTAACAGAATTCTTCATTTTTGTCCTTTTGGCCAGATCTGGA
TTGCCTGGCCATTCCTGCTTGCCTTGGAGGCTGGGACATCTAGGATCTAGCAAAAGGGAA
TGATAGTTCCATGTGCTATTGGTAAAAGTTTGTATTCCGTCAGTGTTTTTTTGTTTTTGT
TTTTGGTCTTTTTTTGGTCTTTTTTTTGTCTTTTTAGGGCTGCACCCGAGGCATATGGAA
G

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               574-693, + strand, RNAz p=0.972189

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               574-693, + strand, RNAz p=0.972189

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               598-689, + strand, RNAmicro p=0.999995

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               598-689, + strand, RNAmicro p=0.999995

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-715, gnl|bosTau2|chr18 (20048563-20047865)
               

               
               1-715, gnl|Hg17|chr16 (52325740-52326413)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-715, gnl|bosTau2|chr18 (20048563-20047865)
               

               
               1-715, gnl|Hg17|chr16 (52325740-52326413)

	1-715, gnl\|bosTau2\|chr18 (20048563-20047865)
	1-715, gnl\|Hg17\|chr16 (52325740-52326413)